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  5. PSME_00018809-RA

PSME_00018809-RA


Description : (at5g06710 : 140.0) Homeobox-leucine zipper protein.; homeobox from Arabidopsis thaliana (HAT14); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT4G17460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 268.0) & (original description: no original description)


Gene families : OG_42_0000184 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00018809-RA
Cluster HCCA clusters: Cluster_294

Target Alias Description ECC score Gene Family Method Actions
A4A49_15384 No alias homeobox-leucine zipper protein hat14 0.02 Orthogroups_2024-Update
At5g06710 No alias Homeobox-leucine zipper protein HAT14... 0.02 Orthogroups_2024-Update
Bradi3g21480 No alias homeobox from Arabidopsis thaliana 0.02 Orthogroups_2024-Update
GRMZM2G047715 No alias homeobox from Arabidopsis thaliana 0.04 Orthogroups_2024-Update
Glyma.05G062700 No alias homeobox protein 2 0.02 Orthogroups_2024-Update
MA_21460g0010 No alias (at5g06710 : 130.0) Homeobox-leucine zipper protein.;... 0.02 Orthogroups_2024-Update
PSME_00008883-RA No alias (at2g22800 : 108.0) Encodes homeobox protein HAT9.;... 0.05 Orthogroups_2024-Update
PSME_00027334-RA No alias (at4g16780 : 190.0) Encodes a homeodomain-leucine zipper... 0.03 Orthogroups_2024-Update
PSME_00038042-RA No alias (at5g06710 : 121.0) Homeobox-leucine zipper protein.;... 0.03 Orthogroups_2024-Update
Potri.002G113400 No alias Homeobox-leucine zipper protein family 0.03 Orthogroups_2024-Update
Seita.5G241600.1 No alias HD-ZIP I/II-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G297200.1 No alias HD-ZIP I/II-type transcription factor 0.02 Orthogroups_2024-Update
Solyc08g078300 No alias Homeobox-leucine zipper family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen08g003230 No alias Homeobox associated leucine zipper 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 109 163
No external refs found!