Description : (at5g05390 : 800.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 12 (LAC12); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 5 (TAIR:AT2G40370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q40588|aso_tobac : 238.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Nicotiana tabacum (Common tobacco) & (reliability: 1600.0) & (original description: no original description)
Gene families : OG_42_0000051 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000051_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00018932-RA | |
Cluster | HCCA clusters: Cluster_824 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_13303 | No alias | laccase-7 | 0.02 | Orthogroups_2024-Update | |
A4A49_57609 | No alias | laccase-5 | 0.03 | Orthogroups_2024-Update | |
A4A49_64623 | No alias | laccase-5 | 0.05 | Orthogroups_2024-Update | |
At2g30210 | No alias | Laccase-3 [Source:UniProtKB/Swiss-Prot;Acc:Q56YT0] | 0.02 | Orthogroups_2024-Update | |
At3g09220 | No alias | Laccase-7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR40] | 0.03 | Orthogroups_2024-Update | |
Bradi2g23350 | No alias | laccase 17 | 0.1 | Orthogroups_2024-Update | |
Brara.E01299.1 | No alias | EC_1.10 oxidoreductase acting on diphenol or related... | 0.05 | Orthogroups_2024-Update | |
Brara.E02945.1 | No alias | lignin laccase & EC_1.10 oxidoreductase acting on... | 0.02 | Orthogroups_2024-Update | |
GRMZM2G336337 | No alias | laccase 12 | 0.03 | Orthogroups_2024-Update | |
Glyma.14G198900 | No alias | laccase 3 | 0.04 | Orthogroups_2024-Update | |
MA_118833g0010 | No alias | (at5g60020 : 763.0) putative laccase, a member of... | 0.04 | Orthogroups_2024-Update | |
MA_28768g0010 | No alias | (at2g38080 : 580.0) Encodes a protein with similarity to... | 0.02 | Orthogroups_2024-Update | |
MA_33288g0010 | No alias | (at5g05390 : 575.0) putative laccase, a member of... | 0.02 | Orthogroups_2024-Update | |
PSME_00014449-RA | No alias | (at5g60020 : 734.0) putative laccase, a member of... | 0.05 | Orthogroups_2024-Update | |
PSME_00015371-RA | No alias | (at5g05390 : 674.0) putative laccase, a member of... | 0.06 | Orthogroups_2024-Update | |
PSME_00024478-RA | No alias | (at5g05390 : 702.0) putative laccase, a member of... | 0.03 | Orthogroups_2024-Update | |
PSME_00028271-RA | No alias | (at5g05390 : 745.0) putative laccase, a member of... | 0.05 | Orthogroups_2024-Update | |
PSME_00039922-RA | No alias | (at5g60020 : 722.0) putative laccase, a member of... | 0.03 | Orthogroups_2024-Update | |
PSME_00044158-RA | No alias | (at2g40370 : 673.0) putative laccase, a member of... | 0.03 | Orthogroups_2024-Update | |
PSME_00044448-RA | No alias | (at5g05390 : 808.0) putative laccase, a member of... | 0.03 | Orthogroups_2024-Update | |
Potri.004G156400 | No alias | laccase 11 | 0.02 | Orthogroups_2024-Update | |
Potri.010G183600 | No alias | laccase 5 | 0.02 | Orthogroups_2024-Update | |
Potri.015G040700 | No alias | laccase 1 | 0.03 | Orthogroups_2024-Update | |
Potri.019G088900 | No alias | laccase 14 | 0.03 | Orthogroups_2024-Update | |
Pp1s175_122V6 | No alias | laccase 90a | 0.02 | Orthogroups_2024-Update | |
Solyc04g072280 | No alias | Laccase (AHRD V3.3 *** A0A022Q9N6_ERYGU) | 0.02 | Orthogroups_2024-Update | |
Sopen04g028460 | No alias | Multicopper oxidase | 0.02 | Orthogroups_2024-Update | |
Sopen10g034550 | No alias | Multicopper oxidase | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005507 | copper ion binding | IEA | InterProScan predictions |
MF | GO:0016491 | oxidoreductase activity | IEA | InterProScan predictions |
BP | GO:0055114 | oxidation-reduction process | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000145 | exocyst | IEP | Predicted GO |
MF | GO:0004180 | carboxypeptidase activity | IEP | Predicted GO |
MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | Predicted GO |
BP | GO:0006508 | proteolysis | IEP | Predicted GO |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Predicted GO |
BP | GO:0006887 | exocytosis | IEP | Predicted GO |
MF | GO:0008238 | exopeptidase activity | IEP | Predicted GO |
BP | GO:0016192 | vesicle-mediated transport | IEP | Predicted GO |
MF | GO:0016787 | hydrolase activity | IEP | Predicted GO |
MF | GO:0019899 | enzyme binding | IEP | Predicted GO |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Predicted GO |
MF | GO:0030599 | pectinesterase activity | IEP | Predicted GO |
MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Predicted GO |
BP | GO:0032940 | secretion by cell | IEP | Predicted GO |
BP | GO:0042545 | cell wall modification | IEP | Predicted GO |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Predicted GO |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Predicted GO |
MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Predicted GO |
CC | GO:0044448 | cell cortex part | IEP | Predicted GO |
BP | GO:0045229 | external encapsulating structure organization | IEP | Predicted GO |
BP | GO:0046903 | secretion | IEP | Predicted GO |
BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Predicted GO |
MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Predicted GO |
MF | GO:0070008 | serine-type exopeptidase activity | IEP | Predicted GO |
BP | GO:0071554 | cell wall organization or biogenesis | IEP | Predicted GO |
BP | GO:0071555 | cell wall organization | IEP | Predicted GO |
CC | GO:0099023 | tethering complex | IEP | Predicted GO |
No external refs found! |