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  5. PSME_00018959-RA

PSME_00018959-RA


Description : (at5g42690 : 194.0) Protein of unknown function, DUF547; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT4G37080.3); Has 830 Blast hits to 816 proteins in 172 species: Archae - 4; Bacteria - 246; Metazoa - 31; Fungi - 0; Plants - 470; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (reliability: 388.0) & (original description: no original description)


Gene families : OG_42_0000727 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000727_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00018959-RA
Cluster HCCA clusters: Cluster_404

Target Alias Description ECC score Gene Family Method Actions
PSME_00016839-RA No alias (at4g37080 : 189.0) Protein of unknown function, DUF547;... 0.05 Orthogroups_2024-Update
PSME_00031716-RA No alias (at4g37080 : 134.0) Protein of unknown function, DUF547;... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
BP GO:0002376 immune system process IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
MF GO:0005126 cytokine receptor binding IEP Predicted GO
MF GO:0005137 interleukin-5 receptor binding IEP Predicted GO
BP GO:0006955 immune response IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
MF GO:0070851 growth factor receptor binding IEP Predicted GO
InterPro domains Description Start Stop
IPR025757 MIP1_Leuzipper 56 130
IPR006869 DUF547 394 447
No external refs found!