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  5. PSME_00018966-RA

PSME_00018966-RA


Description : (at4g11240 : 498.0) encodes a type I serine/threonine protein phosphatase expressed in expressed in roots, rosettes and flowers.; TOPP7; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: type one serine/threonine protein phosphatase 3 (TAIR:AT1G64040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p48480|pp11_acecl : 479.0) Serine/threonine-protein phosphatase PP1 isozyme 1 (EC 3.1.3.16) - Acetabularia cliftonii (Green alga) & (reliability: 996.0) & (original description: no original description)


Gene families : OG_42_0000505 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000505_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00018966-RA
Cluster HCCA clusters: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
Brara.I01273.1 No alias catalytic component of PP1 phosphatase & EC_3.1... 0.04 Orthogroups_2024-Update
GRMZM2G338631 No alias type one serine/threonine protein phosphatase 2 0.02 Orthogroups_2024-Update
Glyma.02G251600 No alias type one serine/threonine protein phosphatase 4 0.03 Orthogroups_2024-Update
LOC_Os03g16110 No alias Ser/Thr protein phosphatase family protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.009G037700 No alias type one serine/threonine protein phosphatase 2 0.02 Orthogroups_2024-Update
Potri.019G018000 No alias type one serine/threonine protein phosphatase 4 0.03 Orthogroups_2024-Update
evm.model.contig_717.1 No alias (p48480|pp11_acecl : 495.0) Serine/threonine-protein... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR031675 STPPase_N 11 58
IPR004843 Calcineurin-like_PHP_ApaH 60 232
No external refs found!