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  5. PSME_00019014-RA

PSME_00019014-RA


Description : (at2g22125 : 315.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Armadillo-like helical (InterPro:IPR011989), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein (TAIR:AT1G77460.2); Has 7763 Blast hits to 3084 proteins in 288 species: Archae - 8; Bacteria - 60; Metazoa - 1765; Fungi - 937; Plants - 4329; Viruses - 0; Other Eukaryotes - 664 (source: NCBI BLink). & (reliability: 630.0) & (original description: no original description)


Gene families : OG_42_0001151 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001151_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00019014-RA
Cluster HCCA clusters: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Brara.D01313.1 No alias cellulose synthase CSC-interactive protein *(CSI) 0.03 Orthogroups_2024-Update
PSME_00012611-RA No alias (at2g22125 : 440.0) binding; FUNCTIONS IN: binding;... 0.04 Orthogroups_2024-Update
PSME_00017335-RA No alias (at2g22125 : 177.0) binding; FUNCTIONS IN: binding;... 0.04 Orthogroups_2024-Update
Pp1s20_50V6 No alias armadillo beta-catenin-like repeat familyexpressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
BP GO:0002376 immune system process IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
MF GO:0005126 cytokine receptor binding IEP Predicted GO
MF GO:0005137 interleukin-5 receptor binding IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006955 immune response IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0070851 growth factor receptor binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000008 C2_dom 234 317
No external refs found!