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  5. PSME_00019217-RA

PSME_00019217-RA


Description : (at4g31590 : 185.0) encodes a gene similar to cellulose synthase; Cellulose-synthase-like C5 (CSLC5); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Glycosyl transferase family 2 protein (TAIR:AT2G24630.1); Has 5645 Blast hits to 5642 proteins in 1596 species: Archae - 219; Bacteria - 4417; Metazoa - 64; Fungi - 93; Plants - 510; Viruses - 16; Other Eukaryotes - 326 (source: NCBI BLink). & (reliability: 370.0) & (original description: no original description)


Gene families : OG_42_0000129 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00019217-RA
Cluster HCCA clusters: Cluster_685

Target Alias Description ECC score Gene Family Method Actions
A4A49_14045 No alias putative xyloglucan glycosyltransferase 12 0.02 Orthogroups_2024-Update
At1g24070 No alias Probable glucomannan 4-beta-mannosyltransferase 10... 0.02 Orthogroups_2024-Update
At5g22740 No alias Glycosyltransferase (Fragment)... 0.03 Orthogroups_2024-Update
Bradi3g06740 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G405567 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.02 Orthogroups_2024-Update
HORVU4Hr1G000610.1 No alias EC_2.4 glycosyltransferase & mannan synthase *(CSLA) 0.03 Orthogroups_2024-Update
LOC_Os02g51060 No alias CSLA6 - cellulose synthase-like family A; mannan... 0.03 Orthogroups_2024-Update
Mp1g22770.1 No alias mannan synthase (CSLA) 0.02 Orthogroups_2024-Update
PSME_00009942-RA No alias (at4g07960 : 274.0) encodes a gene similar to cellulose... 0.05 Orthogroups_2024-Update
PSME_00016846-RA No alias (at5g03760 : 284.0) encodes a beta-mannan synthase that... 0.04 Orthogroups_2024-Update
PSME_00039709-RA No alias (at5g03760 : 369.0) encodes a beta-mannan synthase that... 0.01 Orthogroups_2024-Update
PSME_00054676-RA No alias (at4g31590 : 540.0) encodes a gene similar to cellulose... 0.01 Orthogroups_2024-Update
Potri.004G189000 No alias cellulose synthase-like A02 0.06 Orthogroups_2024-Update
Potri.006G116900 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.04 Orthogroups_2024-Update
Seita.2G139000.1 No alias EC_2.4 glycosyltransferase & mannan synthase *(CSLA) 0.02 Orthogroups_2024-Update
Sopen09g003020 No alias Glycosyltransferase like family 2 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR001173 Glyco_trans_2-like 112 217
No external refs found!