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  5. PSME_00019280-RA

PSME_00019280-RA


Description : (at5g53550 : 798.0) YELLOW STRIPE like 3 (YSL3); CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 2 (TAIR:AT5G24380.1). & (reliability: 1596.0) & (original description: no original description)


Gene families : OG_42_0000320 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00019280-RA
Cluster HCCA clusters: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
A4A49_27452 No alias metal-nicotianamine transporter ysl3 0.02 Orthogroups_2024-Update
Bradi5g17230 No alias YELLOW STRIPE like 2 0.03 Orthogroups_2024-Update
Glyma.16G212900 No alias YELLOW STRIPE like 7 0.03 Orthogroups_2024-Update
Mp4g01710.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.04 Orthogroups_2024-Update
Mp4g10660.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Orthogroups_2024-Update
Pp1s2_335V6 No alias oligopeptide transporter opt family 0.02 Orthogroups_2024-Update
Pp1s38_30V6 No alias oligopeptide transporter opt family 0.02 Orthogroups_2024-Update
Seita.1G244400.1 No alias iron chelator transporter *(YSL) & ferric... 0.04 Orthogroups_2024-Update
Seita.7G172900.1 No alias iron chelator transporter *(YSL) & ferric... 0.05 Orthogroups_2024-Update
Sobic.004G224000.2 No alias iron chelator transporter *(YSL) & ferric... 0.02 Orthogroups_2024-Update
Solyc03g031920 No alias Oligopeptide transporter, putative (AHRD V3.3 *** B9SIR4_RICCO) 0.03 Orthogroups_2024-Update
Sopen03g005790 No alias OPT oligopeptide transporter protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004813 OPT 66 686
No external refs found!