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  5. PSME_00019396-RA

PSME_00019396-RA


Description : (at1g18270 : 230.0) ketose-bisphosphate aldolase class-II family protein; FUNCTIONS IN: in 8 functions; INVOLVED IN: oxidation reduction, pentose-phosphate shunt, valine metabolic process, glycolysis, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), Ketose-bisphosphate aldolase, class-II (InterPro:IPR000771), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), Protein of unknown function, DUF1537 (InterPro:IPR010737), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyisobutyrate dehydrogenase-related, conserved site (InterPro:IPR002204); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT4G20930.1). & (reliability: 460.0) & (original description: no original description)


Gene families : OG_42_0006507 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006507_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Type Description Actions
Neighborhood Pseudotsuga release: PSME_00019396-RA

Target Alias Description ECC score Gene Family Method Actions
LOC_Os06g14740 No alias NAD binding domain of 6-phosphogluconate dehydrogenase... 0.01 Orthogroups_2024-Update
PSME_00037112-RA No alias (at1g18270 : 394.0) ketose-bisphosphate aldolase... 0.01 Orthogroups_2024-Update
Pp1s137_96V6 No alias ketose-bisphosphate aldolase class-ii family protein 0.01 Orthogroups_2024-Update
Solyc03g118640 No alias ketose-bisphosphate aldolase class-II family protein... 0.01 Orthogroups_2024-Update
Sopen03g037600 No alias Fructose-bisphosphate aldolase class-II 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0050661 NADP binding IEA InterProScan predictions
MF GO:0051287 NAD binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006115 6PGDH_NADP-bd 24 76
IPR029154 NADP-bd 83 137
No external refs found!