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  5. PSME_00019402-RA

PSME_00019402-RA


Description : (at2g04570 : 296.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G42990.1); Has 3619 Blast hits to 3578 proteins in 263 species: Archae - 0; Bacteria - 457; Metazoa - 0; Fungi - 32; Plants - 3114; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (p40603|apg_brana : 207.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 592.0) & (original description: no original description)


Gene families : OG_42_0000214 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000214_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00019402-RA
Cluster HCCA clusters: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
A4A49_26406 No alias gdsl esteraselipase exl3 0.02 Orthogroups_2024-Update
Bradi1g35340 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.01 Orthogroups_2024-Update
Glyma.11G079400 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G026300 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.01 Orthogroups_2024-Update
Glyma.14G051000 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.04 Orthogroups_2024-Update
Glyma.17G259700 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Orthogroups_2024-Update
MA_10428876g0010 No alias (at1g75880 : 163.0) SGNH hydrolase-type esterase... 0.05 Orthogroups_2024-Update
MA_166543g0010 No alias (at2g04570 : 295.0) GDSL-like Lipase/Acylhydrolase... 0.04 Orthogroups_2024-Update
PSME_00014918-RA No alias (at4g26790 : 354.0) GDSL-like Lipase/Acylhydrolase... 0.04 Orthogroups_2024-Update
PSME_00028340-RA No alias (at2g42990 : 317.0) GDSL-like Lipase/Acylhydrolase... 0.02 Orthogroups_2024-Update
Potri.004G051900 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 Orthogroups_2024-Update
Potri.011G062000 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Orthogroups_2024-Update
Potri.014G160100 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 Orthogroups_2024-Update
Seita.9G003000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc05g043330 No alias GDSL esterase/lipase (AHRD V3.3 *** W9STE9_9ROSA) 0.02 Orthogroups_2024-Update
Sopen04g035420 No alias GDSL-like Lipase/Acylhydrolase 0.02 Orthogroups_2024-Update
Sopen07g024790 No alias GDSL-like Lipase/Acylhydrolase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR001087 GDSL 458 769
IPR001087 GDSL 122 347
No external refs found!