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  5. Sopen05g029940

Sopen05g029940


Description : NOL1/NOP2/sun family


Gene families : OG_42_0003296 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003296_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g029940
Cluster HCCA clusters: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
Brara.A00088.1 No alias tRNA cytidine-methyltransferase *(TRM4) & EC_2.1... 0.02 Orthogroups_2024-Update
Brara.D01326.1 No alias tRNA cytidine-methyltransferase *(TRM4) & EC_2.1... 0.03 Orthogroups_2024-Update
Cre03.g179860 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.02 Orthogroups_2024-Update
Kfl00387_0100 kfl00387_0100_v1.1 (at2g22400 : 427.0) S-adenosyl-L-methionine-dependent... 0.02 Orthogroups_2024-Update
Seita.2G240300.1 No alias tRNA cytidine-methyltransferase *(TRM4) & EC_2.1... 0.04 Orthogroups_2024-Update
Sobic.002G234300.1 No alias tRNA cytidine-methyltransferase *(TRM4) & EC_2.1... 0.04 Orthogroups_2024-Update
Solyc05g051520 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.05 Orthogroups_2024-Update
evm.model.tig00020562.25 No alias (at4g40000 : 302.0) S-adenosyl-L-methionine-dependent... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001678 MeTrfase_RsmB/NOP2 184 365
No external refs found!