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  5. Sopen05g029960

Sopen05g029960


Description : ABC-2 type transporter


Gene families : OG_42_0000390 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000390_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g029960
Cluster HCCA clusters: Cluster_221

Seita.7G032000.1
Target Alias Description ECC score Gene Family Method Actions
169481 No alias white-brown complex homolog protein 11 0.03 Orthogroups_2024-Update
A4A49_00250 No alias abc transporter g family member 11 0.07 Orthogroups_2024-Update
At3g21090 No alias ABC transporter G family member 15... 0.03 Orthogroups_2024-Update
Bradi2g31910 No alias ABC-2 type transporter family protein 0.04 Orthogroups_2024-Update
Bradi4g08130 No alias white-brown complex homolog protein 11 0.03 Orthogroups_2024-Update
Brara.E01628.1 No alias wax lipid exporter *(CER5) & subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Glyma.03G135525 No alias ABC-2 type transporter family protein 0.02 Orthogroups_2024-Update
Glyma.09G160000 No alias white-brown complex homolog protein 11 0.02 Orthogroups_2024-Update
Glyma.13G043600 No alias white-brown complex homolog protein 11 0.02 Orthogroups_2024-Update
Glyma.19G137700 No alias ABC-2 type transporter family protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G018920.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G019010.4 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G027440.2 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_69480g0010 No alias (at1g17840 : 776.0) Encodes a plasma membrane-localized... 0.02 Orthogroups_2024-Update
Potri.001G312200 No alias white-brown complex homolog protein 11 0.02 Orthogroups_2024-Update
Potri.017G155300 No alias white-brown complex homolog protein 11 0.04 Orthogroups_2024-Update
Seita.2G106700.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Seita.3G299000.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Seita.7G176000.1 No alias suberin/cutin lipid exporter *(DSO) & subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Sobic.005G225800.2 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.006G155700.1 No alias suberin/cutin lipid exporter *(DSO) & subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Solyc03g019760 No alias ABC transporter G family member (AHRD V3.3 *** A0A0K9NYG1_ZOSMR) 0.03 Orthogroups_2024-Update
Solyc06g072090 No alias ABC transporter G family member (AHRD V3.3 *** A0A0K9NYG1_ZOSMR) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 437 649
IPR003439 ABC_transporter-like 137 288
No external refs found!