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  5. PSME_00019528-RA

PSME_00019528-RA


Description : (at4g34880 : 206.0) Amidase family protein; FUNCTIONS IN: amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: acrylonitrile catabolic process, aldoxime metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT5G07360.2); Has 15395 Blast hits to 15313 proteins in 2409 species: Archae - 237; Bacteria - 9126; Metazoa - 385; Fungi - 509; Plants - 293; Viruses - 0; Other Eukaryotes - 4845 (source: NCBI BLink). & (reliability: 412.0) & (original description: no original description)


Gene families : OG_42_0001238 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001238_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00019528-RA
Cluster HCCA clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Glyma.05G149500 No alias Amidase family protein 0.02 Orthogroups_2024-Update
LOC_Os04g10530 No alias amidase, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00036672-RA No alias (at4g34880 : 335.0) Amidase family protein; FUNCTIONS... 0.04 Orthogroups_2024-Update
Seita.2G313400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen01g053270 No alias Amidase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR023631 Amidase_dom 55 251
No external refs found!