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  5. PSME_00019699-RA

PSME_00019699-RA


Description : (q39857|xth_soybn : 456.0) Probable xyloglucan endotransglucosylase/hydrolase precursor (EC 2.4.1.207) (Fragment) - Glycine max (Soybean) & (at5g13870 : 441.0) EXGT-A4, endoxyloglucan transferase,; xyloglucan endotransglucosylase/hydrolase 5 (XTH5); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 4 (TAIR:AT2G06850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 882.0) & (original description: no original description)


Gene families : OG_42_0000032 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00019699-RA
Cluster HCCA clusters: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
119243 No alias xyloglucan endotransglucosylase/hydrolase 5 0.04 Orthogroups_2024-Update
A4A49_04196 No alias xyloglucan endotransglucosylasehydrolase protein 9 0.03 Orthogroups_2024-Update
A4A49_17793 No alias putative xyloglucan endotransglucosylasehydrolase protein 26 0.02 Orthogroups_2024-Update
A4A49_21659 No alias xyloglucan endotransglucosylasehydrolase protein 22 0.03 Orthogroups_2024-Update
A4A49_36014 No alias putative xyloglucan endotransglucosylasehydrolase protein 16 0.06 Orthogroups_2024-Update
A4A49_37338 No alias xyloglucan endotransglucosylasehydrolase protein 15 0.02 Orthogroups_2024-Update
At2g06850 No alias Xyloglucan endotransglucosylase/hydrolase protein 4... 0.04 Orthogroups_2024-Update
At2g36870 No alias Probable xyloglucan endotransglucosylase/hydrolase... 0.02 Orthogroups_2024-Update
At4g30290 No alias Xyloglucan endotransglucosylase/hydrolase... 0.03 Orthogroups_2024-Update
At5g65730 No alias Xyloglucan endotransglucosylase/hydrolase... 0.03 Orthogroups_2024-Update
Bradi1g33827 No alias xyloglucan endotransglycosylase 6 0.02 Orthogroups_2024-Update
Bradi1g33840 No alias xyloglucan endotransglucosylase/hydrolase 25 0.04 Orthogroups_2024-Update
Brara.C01845.1 No alias xyloglucan endotransglucosylase/hydrolase *(XTH) &... 0.03 Orthogroups_2024-Update
Brara.E00809.1 No alias xyloglucan endotransglucosylase/hydrolase *(XTH) &... 0.02 Orthogroups_2024-Update
GRMZM2G392125 No alias xyloglucan endotransglucosylase/hydrolase 24 0.03 Orthogroups_2024-Update
Glyma.11G193600 No alias xyloglucan endotransglucosylase/hydrolase 32 0.05 Orthogroups_2024-Update
Glyma.11G253900 No alias xyloglucan endotransglucosylase/hydrolase 16 0.03 Orthogroups_2024-Update
Glyma.13G095200 No alias xyloglucan endotransglycosylase 6 0.04 Orthogroups_2024-Update
Glyma.15G169100 No alias xyloglucan endotransglycosylase 6 0.03 Orthogroups_2024-Update
Glyma.17G064900 No alias Xyloglucan endotransglucosylase/hydrolase family protein 0.03 Orthogroups_2024-Update
Glyma.17G065300 No alias xyloglucan endotransglycosylase 6 0.03 Orthogroups_2024-Update
Glyma.17G157400 No alias xyloglucan endotransglucosylase/hydrolase 6 0.03 Orthogroups_2024-Update
Glyma.18G003200 No alias xyloglucan endotransglucosylase/hydrolase 16 0.03 Orthogroups_2024-Update
Glyma.18G106500 No alias xyloglucan endotransglucosylase/hydrolase 15 0.03 Orthogroups_2024-Update
Glyma.18G165700 No alias xyloglucan endotransglucosylase/hydrolase 2 0.03 Orthogroups_2024-Update
Glyma.19G106700 No alias xyloglucan endotransglucosylase/hydrolase 5 0.02 Orthogroups_2024-Update
HORVU2Hr1G108420.6 No alias EC_2.4 glycosyltransferase 0.04 Orthogroups_2024-Update
HORVU4Hr1G028720.1 No alias EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
HORVU7Hr1G098280.1 No alias EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
LOC_Os03g01800 No alias glycosyl hydrolases family 16, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g13040 No alias glycosyl hydrolases family 16, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g48160 No alias glycosyl hydrolases family 16, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g29750 No alias glycosyl hydrolases family 16, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g39840 No alias glycosyl hydrolases family 16, putative, expressed 0.02 Orthogroups_2024-Update
MA_10430695g0010 No alias (p35694|bru1_soybn : 327.0) Brassinosteroid-regulated... 0.03 Orthogroups_2024-Update
MA_10433908g0010 No alias (at4g03210 : 268.0) encodes a member of xyloglucan... 0.03 Orthogroups_2024-Update
MA_10434153g0010 No alias (q41638|xtha_phaan : 238.0) Xyloglucan... 0.04 Orthogroups_2024-Update
MA_10434153g0020 No alias (q41638|xtha_phaan : 378.0) Xyloglucan... 0.03 Orthogroups_2024-Update
MA_11177g0010 No alias (at5g57550 : 312.0) xyloglucan... 0.04 Orthogroups_2024-Update
MA_20669g0010 No alias (at2g36870 : 290.0) xyloglucan... 0.04 Orthogroups_2024-Update
MA_46026g0020 No alias (at4g03210 : 242.0) encodes a member of xyloglucan... 0.03 Orthogroups_2024-Update
MA_476450g0010 No alias (at5g65730 : 440.0) xyloglucan... 0.03 Orthogroups_2024-Update
MA_781557g0010 No alias (at5g13870 : 271.0) EXGT-A4, endoxyloglucan... 0.03 Orthogroups_2024-Update
MA_848882g0010 No alias (at5g65730 : 338.0) xyloglucan... 0.04 Orthogroups_2024-Update
MA_894023g0010 No alias (at5g13870 : 233.0) EXGT-A4, endoxyloglucan... 0.04 Orthogroups_2024-Update
MA_96657g0010 No alias (at5g57550 : 317.0) xyloglucan... 0.04 Orthogroups_2024-Update
Mp2g17810.1 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.02 Orthogroups_2024-Update
Mp2g18350.1 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.02 Orthogroups_2024-Update
Mp2g18360.1 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.02 Orthogroups_2024-Update
Mp2g21520.1 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.03 Orthogroups_2024-Update
Mp4g01200.1 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.02 Orthogroups_2024-Update
Mp4g10000.1 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.03 Orthogroups_2024-Update
PSME_00001208-RA No alias (at4g03210 : 319.0) encodes a member of xyloglucan... 0.04 Orthogroups_2024-Update
PSME_00016554-RA No alias (at2g36870 : 288.0) xyloglucan... 0.04 Orthogroups_2024-Update
PSME_00017521-RA No alias (at4g03210 : 345.0) encodes a member of xyloglucan... 0.03 Orthogroups_2024-Update
PSME_00018475-RA No alias (at5g57550 : 323.0) xyloglucan... 0.06 Orthogroups_2024-Update
PSME_00022622-RA No alias (q41638|xtha_phaan : 479.0) Xyloglucan... 0.04 Orthogroups_2024-Update
PSME_00023360-RA No alias (p35694|bru1_soybn : 312.0) Brassinosteroid-regulated... 0.09 Orthogroups_2024-Update
PSME_00028627-RA No alias (q41638|xtha_phaan : 479.0) Xyloglucan... 0.04 Orthogroups_2024-Update
PSME_00032821-RA No alias (p35694|bru1_soybn : 309.0) Brassinosteroid-regulated... 0.03 Orthogroups_2024-Update
PSME_00035710-RA No alias (at2g36870 : 291.0) xyloglucan... 0.03 Orthogroups_2024-Update
PSME_00035711-RA No alias (at2g36870 : 291.0) xyloglucan... 0.03 Orthogroups_2024-Update
PSME_00040047-RA No alias (at2g36870 : 242.0) xyloglucan... 0.04 Orthogroups_2024-Update
PSME_00045889-RA No alias (p35694|bru1_soybn : 350.0) Brassinosteroid-regulated... 0.03 Orthogroups_2024-Update
PSME_00047162-RA No alias (at4g03210 : 301.0) encodes a member of xyloglucan... 0.04 Orthogroups_2024-Update
PSME_00047577-RA No alias (at4g03210 : 346.0) encodes a member of xyloglucan... 0.03 Orthogroups_2024-Update
Potri.001G071000 No alias xyloglucan endotransglucosylase/hydrolase 5 0.03 Orthogroups_2024-Update
Potri.007G008500 No alias xyloglucan endotransglucosylase/hydrolase 6 0.04 Orthogroups_2024-Update
Potri.009G006600 No alias xyloglucan endotransglucosylase/hydrolase 32 0.03 Orthogroups_2024-Update
Potri.011G077300 No alias xyloglucan endotransglucosylase/hydrolase 16 0.02 Orthogroups_2024-Update
Potri.014G146100 No alias xyloglucan endotransglucosylase/hydrolase 16 0.03 Orthogroups_2024-Update
Pp1s122_57V6 No alias brassinosteroid-regulated protein bru1 0.03 Orthogroups_2024-Update
Pp1s168_29V6 No alias xyloglucan endotransglycosylase 0.02 Orthogroups_2024-Update
Pp1s168_54V6 No alias xyloglucan endotransglucosylase hydrolase protein a 0.02 Orthogroups_2024-Update
Pp1s213_129V6 No alias xyloglucan endotransglucosylase hydrolase 0.02 Orthogroups_2024-Update
Pp1s309_38V6 No alias xyloglucan endotransglycosylase 0.03 Orthogroups_2024-Update
Pp1s410_28V6 No alias Probable xyloglucan endotransglucosylase/hydrolase... 0.04 Orthogroups_2024-Update
Pp1s4_32V6 No alias xyloglucan endotransglucosylase hydrolase protein a 0.02 Orthogroups_2024-Update
Seita.1G125500.1 No alias EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
Seita.4G246100.1 No alias EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
Seita.4G246400.1 No alias EC_2.4 glycosyltransferase 0.05 Orthogroups_2024-Update
Seita.8G142000.1 No alias EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
Seita.9G573900.1 No alias xyloglucan endotransglucosylase/hydrolase *(XTH) &... 0.02 Orthogroups_2024-Update
Sobic.001G309000.1 No alias xyloglucan endotransglucosylase/hydrolase *(XTH) &... 0.03 Orthogroups_2024-Update
Sobic.001G538000.1 No alias xyloglucan endotransglucosylase/hydrolase *(XTH) &... 0.02 Orthogroups_2024-Update
Sobic.005G140001.1 No alias EC_2.4 glycosyltransferase 0.02 Orthogroups_2024-Update
Sobic.010G246400.1 No alias EC_2.4 glycosyltransferase 0.02 Orthogroups_2024-Update
Sobic.010G246600.1 No alias EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
Solyc03g093110 No alias xyloglucan endotransglucosylase-hydrolase 0.03 Orthogroups_2024-Update
Solyc07g006850 No alias Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Solyc07g006860 No alias Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc09g008320 No alias Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc11g065600 No alias xyloglucan endotransglucosylase-hydrolase 4 0.03 Orthogroups_2024-Update
Solyc12g007250 No alias Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen01g027910 No alias Glycosyl hydrolases family 16 0.03 Orthogroups_2024-Update
Sopen02g036490 No alias Glycosyl hydrolases family 16 0.02 Orthogroups_2024-Update
Sopen03g023910 No alias Glycosyl hydrolases family 16 0.03 Orthogroups_2024-Update
Sopen03g023920 No alias Glycosyl hydrolases family 16 0.03 Orthogroups_2024-Update
Sopen07g005120 No alias Glycosyl hydrolases family 16 0.03 Orthogroups_2024-Update
Sopen07g026530 No alias Glycosyl hydrolases family 16 0.04 Orthogroups_2024-Update
Sopen07g029350 No alias Glycosyl hydrolases family 16 0.02 Orthogroups_2024-Update
Sopen11g026010 No alias Glycosyl hydrolases family 16 0.02 Orthogroups_2024-Update
Sopen12g006400 No alias Glycosyl hydrolases family 16 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
CC GO:0005618 cell wall IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
BP GO:0006073 cellular glucan metabolic process IEA InterProScan predictions
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEA InterProScan predictions
CC GO:0048046 apoplast IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR010713 XET_C 278 324
IPR000757 GH16 70 250
No external refs found!