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  5. PSME_00019774-RA

PSME_00019774-RA


Description : (at4g29880 : 252.0) Encodes PIRL7, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction.; plant intracellular ras group-related LRR 7 (PIRL7); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 6 (TAIR:AT2G19330.1); Has 62582 Blast hits to 28443 proteins in 1064 species: Archae - 25; Bacteria - 6458; Metazoa - 27380; Fungi - 2135; Plants - 22921; Viruses - 26; Other Eukaryotes - 3637 (source: NCBI BLink). & (reliability: 494.0) & (original description: no original description)


Gene families : OG_42_0003768 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003768_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00019774-RA

Target Alias Description ECC score Gene Family Method Actions
MA_16171g0020 No alias (at4g29880 : 188.0) Encodes PIRL7, a member of the Plant... 0.03 Orthogroups_2024-Update
MA_27580g0010 No alias (at4g29880 : 256.0) Encodes PIRL7, a member of the Plant... 0.03 Orthogroups_2024-Update
PSME_00003647-RA No alias (at4g29880 : 250.0) Encodes PIRL7, a member of the Plant... 0.05 Orthogroups_2024-Update
PSME_00015307-RA No alias (at2g19330 : 246.0) Encodes PIRL6, a member of the Plant... 0.02 Orthogroups_2024-Update
PSME_00033816-RA No alias (at2g19330 : 249.0) Encodes PIRL6, a member of the Plant... 0.04 Orthogroups_2024-Update
PSME_00048100-RA No alias (at4g26050 : 198.0) Encodes PIRL8, a member of the Plant... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 103 160
IPR001611 Leu-rich_rpt 267 282
No external refs found!