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  5. PSME_00019999-RA

PSME_00019999-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000435 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000435_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00019999-RA
Cluster HCCA clusters: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
A4A49_00190 No alias hypothetical protein 0.03 Orthogroups_2024-Update
A4A49_34023 No alias hypothetical protein 0.04 Orthogroups_2024-Update
A4A49_39401 No alias transcription factor bhlh55 0.03 Orthogroups_2024-Update
Bradi2g00740 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Brara.H01082.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.H01580.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
Brara.K00200.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G169947 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.06G291900 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G149900 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.07 Orthogroups_2024-Update
Glyma.09G150000 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G114300 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G075000 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.17G090500 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
PSME_00004974-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00012478-RA No alias (at4g25410 : 87.4) basic helix-loop-helix (bHLH)... 0.03 Orthogroups_2024-Update
PSME_00017592-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00040197-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00047140-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00052913-RA No alias (at4g25400 : 80.9) basic helix-loop-helix (bHLH)... 0.05 Orthogroups_2024-Update
Potri.012G132000 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.013G129800 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.015G134300 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Seita.5G072700.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
Seita.5G073000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.003G102200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc03g006910 No alias bHLH transcription factor 019 0.03 Orthogroups_2024-Update
Solyc03g114230 No alias bHLH transcription factor 082 0.03 Orthogroups_2024-Update
Solyc09g074810 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily... 0.02 Orthogroups_2024-Update
Sopen03g033330 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 181 231
No external refs found!