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  5. PSME_00020314-RA

PSME_00020314-RA


Description : (at3g62040 : 197.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pyrimidine 5-nucleotidase (InterPro:IPR010237), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G59480.1); Has 2327 Blast hits to 2327 proteins in 521 species: Archae - 22; Bacteria - 785; Metazoa - 0; Fungi - 147; Plants - 198; Viruses - 0; Other Eukaryotes - 1175 (source: NCBI BLink). & (reliability: 394.0) & (original description: no original description)


Gene families : OG_42_0000537 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000537_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00020314-RA
Cluster HCCA clusters: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
A4A49_39749 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Bradi1g11620 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.02 Orthogroups_2024-Update
PSME_00004481-RA No alias (at5g02230 : 276.0) Haloacid dehalogenase-like hydrolase... 0.04 Orthogroups_2024-Update
Pp1s164_92V6 No alias catalytic hydrolase 0.02 Orthogroups_2024-Update
Sobic.001G125000.1 No alias xanthosine monophosphate phosphatase *(XMPP) 0.04 Orthogroups_2024-Update
Solyc09g075890 No alias Haloacid dehalogenase-like hydrolase (AHRD V3.3 *** B7FKK9_MEDTR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!