1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00020486-RA

PSME_00020486-RA


Description : (at2g44580 : 265.0) zinc ion binding; CONTAINS InterPro DOMAIN/s: Sister chromatid cohesion protein DCC1 (InterPro:IPR019128); Has 214 Blast hits to 211 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 115; Fungi - 49; Plants - 36; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 530.0) & (original description: no original description)


Gene families : OG_42_0002192 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002192_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00020486-RA
Cluster HCCA clusters: Cluster_268

Target Alias Description ECC score Gene Family Method Actions
PSME_00011879-RA No alias (at2g44580 : 251.0) zinc ion binding; CONTAINS InterPro... 0.05 Orthogroups_2024-Update
PSME_00036867-RA No alias (at2g44580 : 256.0) zinc ion binding; CONTAINS InterPro... 0.04 Orthogroups_2024-Update
PSME_00040667-RA No alias (at2g44580 : 270.0) zinc ion binding; CONTAINS InterPro... 0.04 Orthogroups_2024-Update
PSME_00049439-RA No alias (at2g44580 : 308.0) zinc ion binding; CONTAINS InterPro... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0007064 mitotic sister chromatid cohesion IEA InterProScan predictions
CC GO:0031390 Ctf18 RFC-like complex IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0071702 organic substance transport IEP Predicted GO
InterPro domains Description Start Stop
IPR019128 Dcc1 7 302
No external refs found!