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  5. PSME_00020625-RA

PSME_00020625-RA


Description : (at4g29260 : 116.0) HAD superfamily, subfamily IIIB acid phosphatase ; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase (Class B) (InterPro:IPR005519), Vegetative storage protein/acid phosphatase (InterPro:IPR014403), Acid phosphatase, plant (InterPro:IPR010028); BEST Arabidopsis thaliana protein match is: HAD superfamily, subfamily IIIB acid phosphatase (TAIR:AT4G29270.1); Has 713 Blast hits to 710 proteins in 181 species: Archae - 0; Bacteria - 300; Metazoa - 2; Fungi - 0; Plants - 366; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (p15490|vspa_soybn : 92.8) Stem 28 kDa glycoprotein precursor (Vegetative storage protein A) - Glycine max (Soybean) & (reliability: 232.0) & (original description: no original description)


Gene families : OG_42_0000287 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000287_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00020625-RA
Cluster HCCA clusters: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
A4A49_04288 No alias acid phosphatase 1 0.03 Orthogroups_2024-Update
Brara.H01446.1 No alias acid phosphatase storage protein 0.02 Orthogroups_2024-Update
Brara.I01816.1 No alias acid phosphatase storage protein 0.02 Orthogroups_2024-Update
GRMZM5G839794 No alias HAD superfamily, subfamily IIIB acid phosphatase 0.02 Orthogroups_2024-Update
MA_18594g0010 No alias (at4g29260 : 232.0) HAD superfamily, subfamily IIIB acid... 0.04 Orthogroups_2024-Update
Sobic.001G382900.1 No alias acid phosphatase storage protein 0.03 Orthogroups_2024-Update
Solyc06g034110 No alias Tomato acid phosphatase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005519 Acid_phosphat_B-like 106 266
No external refs found!