Sopen05g030710

Description : Translation initiation factor 1A / IF-1

Gene families : OG_42_0006135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006135_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen05g030710
Cluster	HCCA clusters: Cluster_178

Target	Alias	Description	ECC score	Gene Family Method	Actions
A4A49_00127	No alias	putative aarf domain-containing protein kinase, chloroplastic	0.02	Orthogroups_2024-Update
LOC_Os03g02310	No alias	RNA binding protein, putative, expressed	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0003743	translation initiation factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006413	translational initiation	IEA	InterProScan predictions
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR006196	RNA-binding_domain_S1_IF1	23	73

External Links

No external refs found!