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  5. PSME_00020741-RA

PSME_00020741-RA


Description : (p17299|act3_orysa : 570.0) Actin-3 - Oryza sativa (Rice) & (at5g09810 : 566.0) Member of Actin gene family.Mutants are defective in germination and root growth.; actin 7 (ACT7); FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, nucleolus, cell wall, cytoskeleton, plasma membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15241 Blast hits to 14839 proteins in 3047 species: Archae - 8; Bacteria - 21; Metazoa - 5732; Fungi - 5247; Plants - 1603; Viruses - 2; Other Eukaryotes - 2628 (source: NCBI BLink). & (reliability: 1036.0) & (original description: no original description)


Gene families : OG_42_0000262 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000262_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00020741-RA
Cluster HCCA clusters: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
233752 No alias actin 7 0.02 Orthogroups_2024-Update
At2g42100 No alias Putative actin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYC2] 0.03 Orthogroups_2024-Update
At5g59370 No alias Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P53494] 0.03 Orthogroups_2024-Update
Brara.B00330.1 No alias actin filament protein 0.03 Orthogroups_2024-Update
Brara.B01101.1 No alias actin filament protein 0.03 Orthogroups_2024-Update
Glyma.11G139800 No alias actin-11 0.02 Orthogroups_2024-Update
Glyma.19G000900 No alias actin-11 0.02 Orthogroups_2024-Update
HORVU5Hr1G000180.1 No alias actin filament protein 0.02 Orthogroups_2024-Update
Mpzg00230.1 No alias actin filament protein 0.02 Orthogroups_2024-Update
PSME_00051304-RA No alias (at5g09810 : 651.0) Member of Actin gene family.Mutants... 0.03 Orthogroups_2024-Update
Potri.008G055500 No alias actin-11 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
InterPro domains Description Start Stop
IPR004000 Actin 19 312
No external refs found!