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  5. Sopen05g030790

Sopen05g030790


Description : Pollen allergen


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g030790
Cluster HCCA clusters: Cluster_263

Target Alias Description ECC score Gene Family Method Actions
Brara.J02891.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Glyma.01G050100 No alias expansin A1 0.04 Orthogroups_2024-Update
LOC_Os06g01920 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_36587g0010 No alias (at2g40610 : 414.0) member of Alpha-Expansin Gene... 0.04 Orthogroups_2024-Update
PSME_00000910-RA No alias (at5g05290 : 323.0) Encodes an expansin. Naming... 0.02 Orthogroups_2024-Update
Potri.009G031800 No alias expansin A4 0.02 Orthogroups_2024-Update
Solyc09g018020 No alias Expansin (AHRD V3.3 *** G4XZW3_9GENT) 0.02 Orthogroups_2024-Update
Solyc12g089380 No alias expansin 8 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 69 155
IPR007117 Expansin_CBD 167 244
No external refs found!