1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00020881-RA

PSME_00020881-RA


Description : (at5g15740 : 708.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G02250.1); Has 822 Blast hits to 815 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 822; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1388.0) & (original description: no original description)


Gene families : OG_42_0000714 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000714_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00020881-RA
Cluster HCCA clusters: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
110454 No alias O-fucosyltransferase family protein 0.02 Orthogroups_2024-Update
At5g15740 No alias O-fucosyltransferase 34 [Source:UniProtKB/Swiss-Prot;Acc:Q4V398] 0.03 Orthogroups_2024-Update
Bradi1g43560 No alias O-fucosyltransferase family protein 0.05 Orthogroups_2024-Update
Bradi2g04220 No alias O-fucosyltransferase family protein 0.02 Orthogroups_2024-Update
Brara.H02589.1 No alias rhamnosyltransferase *(RRT) 0.03 Orthogroups_2024-Update
Glyma.01G052500 No alias O-fucosyltransferase family protein 0.03 Orthogroups_2024-Update
Glyma.06G206600 No alias O-fucosyltransferase family protein 0.03 Orthogroups_2024-Update
Glyma.17G082000 No alias O-fucosyltransferase family protein 0.05 Orthogroups_2024-Update
Seita.4G124600.1 No alias rhamnosyltransferase *(RRT) 0.02 Orthogroups_2024-Update
Sopen03g033810 No alias GDP-fucose protein O-fucosyltransferase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
BP GO:0000902 cell morphogenesis IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0009653 anatomical structure morphogenesis IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0032989 cellular component morphogenesis IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0048869 cellular developmental process IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
InterPro domains Description Start Stop
IPR019378 GDP-Fuc_O-FucTrfase 121 440
No external refs found!