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  5. PSME_00020931-RA

PSME_00020931-RA


Description : (at5g20480 : 120.0) Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu.; EF-TU receptor (EFR); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47090.1); Has 211073 Blast hits to 132033 proteins in 4602 species: Archae - 167; Bacteria - 19808; Metazoa - 69159; Fungi - 9873; Plants - 87247; Viruses - 333; Other Eukaryotes - 24486 (source: NCBI BLink). & (p93194|rpk1_iponi : 119.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 220.0) & (original description: no original description)


Gene families : OG_42_0000007 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00020931-RA

Target Alias Description ECC score Gene Family Method Actions
A4A49_36822 No alias lrr receptor-like serinethreonine-protein kinase fls2 0.04 Orthogroups_2024-Update
A4A49_38480 No alias putative lrr receptor-like serinethreonine-protein kinase 0.04 Orthogroups_2024-Update
A4A49_42232 No alias lrr receptor-like serinethreonine-protein kinase gso1 0.03 Orthogroups_2024-Update
Brara.K01526.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
HORVU3Hr1G066650.13 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
HORVU5Hr1G095120.2 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
MA_10431203g0010 No alias (at2g24130 : 284.0) Leucine-rich receptor-like protein... 0.03 Orthogroups_2024-Update
Mp6g17260.1 No alias LRR receptor-like serine/threonine-protein kinase GSO2... 0.03 Orthogroups_2024-Update
PSME_00011621-RA No alias (at5g46330 : 541.0) Encodes a leucine-rich repeat... 0.03 Orthogroups_2024-Update
PSME_00025387-RA No alias (at4g36180 : 190.0) Leucine-rich receptor-like protein... 0.02 Orthogroups_2024-Update
PSME_00051160-RA No alias (at5g20480 : 127.0) Encodes a predicted leucine-rich... 0.04 Orthogroups_2024-Update
PSME_00053316-RA No alias (at2g24130 : 617.0) Leucine-rich receptor-like protein... 0.04 Orthogroups_2024-Update
PSME_00055353-RA No alias (at3g47110 : 635.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
Potri.018G103400 No alias Leucine-rich receptor-like protein kinase family protein 0.03 Orthogroups_2024-Update
Seita.3G389600.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
Sopen00g009730 No alias Protein kinase domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 54 83
IPR001611 Leu-rich_rpt 85 105
IPR001611 Leu-rich_rpt 108 129
No external refs found!