Sopen05g030960

Description : AP2 domain

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen05g030960
Cluster	HCCA clusters: Cluster_103

Target	Alias	Description	ECC score	Gene Family Method
409196	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
A4A49_39586	No alias	ethylene-responsive transcription factor erf106	0.05	Orthogroups_2024-Update
At1g19210	No alias	Ethylene-responsive transcription factor ERF017...	0.02	Orthogroups_2024-Update
At1g28160	No alias	Ethylene-responsive transcription factor ERF087...	0.03	Orthogroups_2024-Update
At1g71130	No alias	Ethylene-responsive transcription factor ERF070...	0.02	Orthogroups_2024-Update
At2g33710	No alias	Integrase-type DNA-binding superfamily protein...	0.02	Orthogroups_2024-Update
At2g40350	No alias	Integrase-type DNA-binding superfamily protein...	0.05	Orthogroups_2024-Update
At3g16770	No alias	Ethylene-responsive transcription factor RAP2-3...	0.03	Orthogroups_2024-Update
At4g25480	No alias	Dehydration-responsive element-binding protein 1A...	0.04	Orthogroups_2024-Update
At5g05410	No alias	Dehydration-responsive element-binding protein 2A...	0.02	Orthogroups_2024-Update
At5g25190	No alias	Ethylene-responsive transcription factor ERF003...	0.03	Orthogroups_2024-Update
At5g51190	No alias	Ethylene-responsive transcription factor ERF105...	0.03	Orthogroups_2024-Update
Bradi1g54450	No alias	related to AP2 11	0.02	Orthogroups_2024-Update
Bradi2g29960	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Brara.C01453.1	No alias	subgroup ERF-III transcription factor	0.04	Orthogroups_2024-Update
Brara.C01524.1	No alias	transcription factor *(CBF/DREB1) & subgroup ERF-III...	0.03	Orthogroups_2024-Update
Brara.C03562.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Brara.H01496.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Brara.I00546.1	No alias	cutin and suberin biosynthesis transcription factor...	0.03	Orthogroups_2024-Update
Brara.I00667.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.I04678.1	No alias	subgroup ERF-I transcription factor	0.04	Orthogroups_2024-Update
Brara.I05089.1	No alias	subgroup ERF-VIII transcription factor	0.01	Orthogroups_2024-Update
Brara.I05419.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Brara.I05601.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.K00042.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Brara.K01035.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G053503	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
GRMZM2G466044	No alias	ethylene responsive element binding factor 1	0.02	Orthogroups_2024-Update
Glyma.02G006200	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Glyma.02G080200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.04G217400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.05G062100	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.07G250100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.13G088100	No alias	related to AP2 4	0.01	Orthogroups_2024-Update
Glyma.14G056200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.14G205600	No alias	cytokinin response factor 4	0.02	Orthogroups_2024-Update
Glyma.19G164100	No alias	ethylene response factor 1	0.01	Orthogroups_2024-Update
Glyma.20G070100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.20G115300	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.20G195900	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
HORVU4Hr1G077360.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
HORVU5Hr1G080340.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
HORVU7Hr1G037180.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
LOC_Os02g32140	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os03g08500	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g09810	No alias	ethylene-responsive transcription factor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os09g11460	No alias	AP2 domain containing protein, expressed	0.04	Orthogroups_2024-Update
LOC_Os09g11480	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
MA_100577g0010	No alias	(at5g21960 : 112.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
Mp7g09350.1	No alias	transcription factor (ERF)	0.02	Orthogroups_2024-Update
PSME_00005184-RA	No alias	(q40479\|erf2_tobac : 141.0) Ethylene-responsive...	0.02	Orthogroups_2024-Update
PSME_00012644-RA	No alias	(at4g17500 : 84.3) Encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
PSME_00042940-RA	No alias	(at1g53910 : 121.0) encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00050134-RA	No alias	(at5g19790 : 92.0) encodes a member of the ERF (ethylene...	0.02	Orthogroups_2024-Update
PSME_00057235-RA	No alias	(at5g11590 : 122.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
Potri.001G154200	No alias	ethylene responsive element binding factor 5	0.03	Orthogroups_2024-Update
Potri.001G181500	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.002G124000	No alias	related to AP2 1	0.02	Orthogroups_2024-Update
Potri.003G071666	No alias	related to AP2 12	0.03	Orthogroups_2024-Update
Potri.003G079300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.005G195000	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.010G006800	No alias	ethylene-responsive element binding protein	0.03	Orthogroups_2024-Update
Potri.011G115600	No alias	ethylene responsive element binding factor 4	0.02	Orthogroups_2024-Update
Potri.017G055400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.019G131300	No alias	cytokinin response factor 4	0.04	Orthogroups_2024-Update
Pp1s15_186V6	No alias	transcriptional factor	0.01	Orthogroups_2024-Update
Seita.1G187800.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.1G248300.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Seita.1G257300.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Seita.1G270800.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.2G215500.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.04	Orthogroups_2024-Update
Seita.2G269600.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.3G191900.1	No alias	subgroup ERF-VIII transcription factor	0.02	Orthogroups_2024-Update
Seita.3G281000.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.03	Orthogroups_2024-Update
Seita.4G051200.1	No alias	subgroup ERF-V transcription factor	0.02	Orthogroups_2024-Update
Seita.4G180800.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Seita.6G181700.1	No alias	subgroup ERF-X transcription factor	0.02	Orthogroups_2024-Update
Seita.8G098100.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Seita.9G516500.1	No alias	subgroup ERF-VII transcription factor	0.02	Orthogroups_2024-Update
Sobic.002G212000.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.05	Orthogroups_2024-Update
Sobic.005G087600.2	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Sobic.009G101400.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.03	Orthogroups_2024-Update
Solyc01g095500	No alias	Sl Cytokinin Response Factor 5	0.04	Orthogroups_2024-Update
Solyc04g014530	No alias	Ethylene Response Factor C.2	0.02	Orthogroups_2024-Update
Solyc05g052410	No alias	Dehydration responsive element binding protein (AHRD...	0.03	Orthogroups_2024-Update
Solyc07g054220	No alias	Ethylene-responsive transcription factor ERF053 (AHRD...	0.05	Orthogroups_2024-Update
Solyc08g007230	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc08g082210	No alias	AP2/EREBP transcription factor	0.03	Orthogroups_2024-Update
Solyc12g008350	No alias	dehydration responsive element binding protein 2	0.03	Orthogroups_2024-Update
Solyc12g056980	No alias	Ethylene-responsive element binding-factor (AHRD V3.3...	0.03	Orthogroups_2024-Update
Sopen03g024370	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen04g027740	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	81	131

External Links

No external refs found!

Sopen05g030960

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation