1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00021240-RA

PSME_00021240-RA


Description : (at1g05670 : 266.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G01110.1); Has 76919 Blast hits to 23782 proteins in 722 species: Archae - 3; Bacteria - 657; Metazoa - 3612; Fungi - 1352; Plants - 68766; Viruses - 129; Other Eukaryotes - 2400 (source: NCBI BLink). & (q76c99|rf1_orysa : 241.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 532.0) & (original description: no original description)


Gene families : OG_42_0012668 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0012668_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00021240-RA
Cluster HCCA clusters: Cluster_51


Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 166 213
IPR002885 Pentatricopeptide_repeat 594 635
IPR002885 Pentatricopeptide_repeat 335 384
IPR002885 Pentatricopeptide_repeat 223 269
IPR002885 Pentatricopeptide_repeat 441 489
IPR002885 Pentatricopeptide_repeat 524 572
IPR002885 Pentatricopeptide_repeat 132 160
IPR002885 Pentatricopeptide_repeat 401 432
No external refs found!