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  5. PSME_00021283-RA

PSME_00021283-RA


Description : (at5g21960 : 119.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G19210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 238.0) & (original description: no original description)


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00021283-RA
Cluster HCCA clusters: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
409196 No alias related to AP2 11 0.03 Orthogroups_2024-Update
412693 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
68470 No alias ethylene responsive element binding factor 1 0.02 Orthogroups_2024-Update
73155 No alias DREB and EAR motif protein 3 0.02 Orthogroups_2024-Update
80895 No alias ethylene responsive element binding factor 2 0.03 Orthogroups_2024-Update
A4A49_15668 No alias ethylene-responsive transcription factor rap2-12 0.02 Orthogroups_2024-Update
A4A49_38093 No alias ethylene-responsive transcription factor erf034 0.02 Orthogroups_2024-Update
A4A49_38622 No alias dehydration-responsive element-binding protein 3 0.02 Orthogroups_2024-Update
AC206951.3_FG016 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
At3g15210 No alias Ethylene-responsive transcription factor 4... 0.02 Orthogroups_2024-Update
Bradi1g77120 No alias C-repeat-binding factor 4 0.02 Orthogroups_2024-Update
Brara.A00653.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.B02236.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.03 Orthogroups_2024-Update
Brara.B03207.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.03 Orthogroups_2024-Update
Brara.G03526.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G003466 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G080516 No alias ethylene responsive element binding factor 1 0.05 Orthogroups_2024-Update
GRMZM2G124011 No alias dehydration response element B1A 0.04 Orthogroups_2024-Update
GRMZM2G137341 No alias C-repeat/DRE binding factor 2 0.04 Orthogroups_2024-Update
GRMZM2G138396 No alias redox responsive transcription factor 1 0.03 Orthogroups_2024-Update
GRMZM2G380377 No alias dehydration response element B1A 0.03 Orthogroups_2024-Update
GRMZM2G438202 No alias ethylene responsive element binding factor 4 0.04 Orthogroups_2024-Update
GRMZM2G481668 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
GRMZM5G837876 No alias ethylene-responsive element binding factor 15 0.02 Orthogroups_2024-Update
Glyma.05G062100 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.05G157400 No alias related to AP2 11 0.02 Orthogroups_2024-Update
Glyma.06G042100 No alias DREB and EAR motif protein 3 0.03 Orthogroups_2024-Update
Glyma.06G148400 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.07G212400 No alias redox responsive transcription factor 1 0.02 Orthogroups_2024-Update
Glyma.08G281900 No alias DORNROSCHEN-like 0.03 Orthogroups_2024-Update
Glyma.09G233800 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.10G186800 No alias ethylene response factor 1 0.03 Orthogroups_2024-Update
Glyma.12G162700 No alias ethylene responsive element binding factor 4 0.03 Orthogroups_2024-Update
Glyma.14G056200 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.15G152000 No alias ethylene-responsive element binding protein 0.03 Orthogroups_2024-Update
Glyma.19G142000 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G067110.1 No alias subgroup ERF-VIII transcription factor 0.04 Orthogroups_2024-Update
HORVU4Hr1G077360.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os03g05590 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g52090 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g41130 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_108992g0010 No alias (at1g74930 : 121.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_436575g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_45733g0020 No alias (at1g74930 : 120.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_9304g0020 No alias (at1g28360 : 87.4) encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
Mp6g08690.1 No alias transcription factor (DREB) 0.04 Orthogroups_2024-Update
PSME_00040934-RA No alias (at5g64750 : 100.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
PSME_00046682-RA No alias (at3g16770 : 96.3) Encodes a member of the ERF (ethylene... 0.05 Orthogroups_2024-Update
Potri.001G069300 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.001G397200 No alias ethylene responsive element binding factor 4 0.02 Orthogroups_2024-Update
Potri.002G141200 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.002G153500 No alias related to AP2 11 0.02 Orthogroups_2024-Update
Potri.003G071666 No alias related to AP2 12 0.02 Orthogroups_2024-Update
Potri.007G043400 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.014G025200 No alias related to AP2 1 0.02 Orthogroups_2024-Update
Pp1s149_253V6 No alias ap2 erf domain-containing transcription factor 0.05 Orthogroups_2024-Update
Pp1s53_80V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s72_230V6 No alias ap2 erf domain-containing transcription factor 0.01 Orthogroups_2024-Update
Seita.1G044700.1 No alias cutin and suberin biosynthesis transcription factor... 0.07 Orthogroups_2024-Update
Seita.2G138400.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Seita.2G269600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.3G191900.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Seita.9G500100.1 No alias subgroup ERF-IX transcription factor 0.04 Orthogroups_2024-Update
Sobic.001G473900.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G225700.1 No alias subgroup ERF-X transcription factor 0.02 Orthogroups_2024-Update
Sobic.006G210300.1 No alias subgroup ERF-VIII transcription factor 0.05 Orthogroups_2024-Update
Sobic.006G259000.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Sobic.007G077001.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.007G077100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G077200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G077300.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.009G184400.1 No alias subgroup ERF-VIII transcription factor 0.06 Orthogroups_2024-Update
Solyc04g014530 No alias Ethylene Response Factor C.2 0.04 Orthogroups_2024-Update
Solyc05g050830 No alias Ethylene-responsive transcription factor4 0.02 Orthogroups_2024-Update
Solyc08g080290 No alias Dehydration responsive element binding transcription... 0.03 Orthogroups_2024-Update
Solyc10g006130 No alias EAR motif SlERF36 0.04 Orthogroups_2024-Update
Solyc12g044390 No alias ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.02 Orthogroups_2024-Update
Sopen01g036330 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Sopen02g037700 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen03g002330 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen04g024720 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen04g027740 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen05g029310 No alias AP2 domain 0.05 Orthogroups_2024-Update
Sopen08g026910 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen12g004490 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen12g024030 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 23 72
No external refs found!