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  5. PSME_00021415-RA

PSME_00021415-RA


Description : (at2g47800 : 184.0) Encodes a plasma membrane localized ATPase transporter involved in multidrug transport. The expression of this gene is upregulated by herbicide safeners such as benoxacor, fluxofenim and fenclorim.; multidrug resistance-associated protein 4 (MRP4); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, folic acid transporter activity; INVOLVED IN: response to water deprivation, drug transmembrane transport, response to wounding, response to nematode, stomatal movement; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 10 (TAIR:AT3G62700.1); Has 714857 Blast hits to 368077 proteins in 3991 species: Archae - 12925; Bacteria - 579268; Metazoa - 12980; Fungi - 8565; Plants - 6599; Viruses - 19; Other Eukaryotes - 94501 (source: NCBI BLink). & (reliability: 368.0) & (original description: no original description)


Gene families : OG_42_0000076 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00021415-RA
Cluster HCCA clusters: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
93699 No alias multidrug resistance-associated protein 10 0.02 Orthogroups_2024-Update
Bradi1g48670 No alias multidrug resistance-associated protein 14 0.02 Orthogroups_2024-Update
Bradi2g00417 No alias multidrug resistance-associated protein 3 0.02 Orthogroups_2024-Update
Brara.E02088.1 No alias subfamily ABCC transporter 0.01 Orthogroups_2024-Update
Glyma.09G044500 No alias multidrug resistance-associated protein 4 0.02 Orthogroups_2024-Update
HORVU2Hr1G009580.2 No alias subfamily ABCC transporter 0.02 Orthogroups_2024-Update
HORVU7Hr1G025040.2 No alias subfamily ABCC transporter 0.03 Orthogroups_2024-Update
LOC_Os02g18700 No alias ABC transporter family protein, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os04g13220 No alias ABC transporter family protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g37580 No alias ABC transporter, ATP-binding protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00019176-RA No alias (at3g13080 : 209.0) encodes an ATP-dependent MRP-like... 0.01 Orthogroups_2024-Update
PSME_00020162-RA No alias (at2g47800 : 274.0) Encodes a plasma membrane localized... 0.01 Orthogroups_2024-Update
PSME_00042564-RA No alias (at2g47800 : 256.0) Encodes a plasma membrane localized... 0.01 Orthogroups_2024-Update
Potri.003G197200 No alias multidrug resistance-associated protein 3 0.01 Orthogroups_2024-Update
Potri.003G198400 No alias multidrug resistance-associated protein 3 0.02 Orthogroups_2024-Update
Potri.004G034800 No alias multidrug resistance-associated protein 2 0.01 Orthogroups_2024-Update
Seita.7G216700.1 No alias subfamily ABCC transporter 0.01 Orthogroups_2024-Update
Sobic.010G169000.1 No alias subfamily ABCC transporter 0.02 Orthogroups_2024-Update
Solyc05g014500 No alias ABC transporter family protein (AHRD V3.3 *-* B9GJX7_POPTR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!