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  5. PSME_00021444-RA

PSME_00021444-RA


Description : (at1g22640 : 170.0) MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression; myb domain protein 3 (MYB3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 6 (TAIR:AT4G09460.1); Has 9176 Blast hits to 8476 proteins in 489 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 510; Plants - 6085; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (p10290|mybc_maize : 155.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (reliability: 340.0) & (original description: no original description)


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00021444-RA
Cluster HCCA clusters: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
39499 No alias myb domain protein 13 0.02 Orthogroups_2024-Update
At2g31180 No alias Transcription factor MYB14... 0.03 Orthogroups_2024-Update
At3g12720 No alias AT3g12720/MBK21_8 [Source:UniProtKB/TrEMBL;Acc:Q9LTW2] 0.04 Orthogroups_2024-Update
At3g48920 No alias MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SMT1] 0.02 Orthogroups_2024-Update
At5g23000 No alias Transcription factor RAX1... 0.03 Orthogroups_2024-Update
At5g40350 No alias Transcription factor MYB24... 0.03 Orthogroups_2024-Update
At5g49620 No alias myb domain protein 78 [Source:TAIR;Acc:AT5G49620] 0.02 Orthogroups_2024-Update
At5g57620 No alias Transcription factor MYB36... 0.02 Orthogroups_2024-Update
Brara.A03909.1 No alias MYB class-R2R3 subgroup-8 transcription factor 0.03 Orthogroups_2024-Update
Brara.C00533.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.D01054.1 No alias MYB class-R2R3 subgroup-15 transcription factor 0.03 Orthogroups_2024-Update
Brara.E03277.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Brara.G00616.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Brara.J01871.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Glyma.08G017600 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
Glyma.11G045400 No alias myb domain protein 84 0.03 Orthogroups_2024-Update
Glyma.11G215800 No alias myb domain protein 20 0.02 Orthogroups_2024-Update
Glyma.15G264000 No alias myb domain protein 67 0.03 Orthogroups_2024-Update
Glyma.16G007100 No alias myb domain protein 6 0.03 Orthogroups_2024-Update
Glyma.16G063700 No alias myb domain protein 40 0.03 Orthogroups_2024-Update
Glyma.19G038100 No alias myb domain protein 83 0.02 Orthogroups_2024-Update
LOC_Os01g50720 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g43550 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g36730 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g47460 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g37970 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_10434028g0010 No alias (at1g68320 : 180.0) putative transcription factor:... 0.03 Orthogroups_2024-Update
MA_24271g0020 No alias (at1g34670 : 257.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
MA_37851g0010 No alias (at3g08500 : 182.0) Encodes a putative R2R3-type MYB... 0.03 Orthogroups_2024-Update
MA_8147g0020 No alias (at1g22640 : 206.0) MYB-type transcription factor (MYB3)... 0.02 Orthogroups_2024-Update
MA_96853g0010 No alias (p93417|gam1_orysa : 259.0) Transcription factor GAMYB... 0.03 Orthogroups_2024-Update
PSME_00002485-RA No alias (at3g61250 : 260.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00014640-RA No alias (at3g27810 : 179.0) Encodes a member of the R2R3-MYB... 0.06 Orthogroups_2024-Update
PSME_00014669-RA No alias (at1g22640 : 190.0) MYB-type transcription factor (MYB3)... 0.04 Orthogroups_2024-Update
PSME_00014838-RA No alias (at3g12720 : 234.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00018495-RA No alias (at3g02940 : 176.0) Encodes a putative transcription... 0.05 Orthogroups_2024-Update
PSME_00031159-RA No alias (at4g38620 : 228.0) Encodes a R2R3 MYB protein which is... 0.04 Orthogroups_2024-Update
PSME_00037501-RA No alias (p20025|myb38_maize : 253.0) Myb-related protein Zm38 -... 0.04 Orthogroups_2024-Update
PSME_00041506-RA No alias "(at2g47460 : 179.0) ""MYB12 belongs to subgroup 7 of... 0.04 Orthogroups_2024-Update
PSME_00041883-RA No alias (at3g61250 : 276.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00051224-RA No alias (at5g15310 : 212.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00052494-RA No alias (q7xbh4|myb4_orysa : 219.0) Myb-related protein Myb4... 0.04 Orthogroups_2024-Update
Potri.001G139900 No alias myb domain protein 9 0.03 Orthogroups_2024-Update
Potri.001G267300 No alias myb domain protein 83 0.03 Orthogroups_2024-Update
Potri.005G096600 No alias myb domain protein 63 0.03 Orthogroups_2024-Update
Potri.005G164900 No alias myb domain protein 93 0.02 Orthogroups_2024-Update
Potri.005G224100 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Potri.006G275900 No alias myb domain protein 3 0.03 Orthogroups_2024-Update
Potri.010G123000 No alias myb domain protein 62 0.02 Orthogroups_2024-Update
Potri.010G149900 No alias myb domain protein 108 0.02 Orthogroups_2024-Update
Potri.010G174500 No alias myb domain protein 67 0.02 Orthogroups_2024-Update
Potri.012G140700 No alias myb domain protein 17 0.03 Orthogroups_2024-Update
Potri.013G148600 No alias MYB-like 102 0.02 Orthogroups_2024-Update
Potri.013G149100 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Potri.013G149200 No alias myb domain protein 14 0.03 Orthogroups_2024-Update
Potri.015G143500 No alias myb domain protein 17 0.02 Orthogroups_2024-Update
Potri.017G099500 No alias myb domain protein 121 0.03 Orthogroups_2024-Update
Potri.019G118900 No alias myb domain protein 63 0.02 Orthogroups_2024-Update
Pp1s204_13V6 No alias MDA7.17; myb family transcription factor [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Seita.2G286400.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Seita.3G402900.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.02 Orthogroups_2024-Update
Seita.7G284900.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.02 Orthogroups_2024-Update
Seita.7G307500.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.01 Orthogroups_2024-Update
Sobic.006G115200.1 No alias transcriptional regulator *(MS188) & transcriptional... 0.02 Orthogroups_2024-Update
Sobic.006G148000.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.05 Orthogroups_2024-Update
Solyc04g077260 No alias blind-like3 0.02 Orthogroups_2024-Update
Solyc06g053610 No alias R2R3MYB transcription factor 14 0.04 Orthogroups_2024-Update
Sopen01g034190 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 62
IPR001005 SANT/Myb 68 113
No external refs found!