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  5. PSME_00021445-RA

PSME_00021445-RA


Description : (at1g22640 : 169.0) MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression; myb domain protein 3 (MYB3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 6 (TAIR:AT4G09460.1); Has 9176 Blast hits to 8476 proteins in 489 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 510; Plants - 6085; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (p10290|mybc_maize : 155.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (reliability: 338.0) & (original description: no original description)


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00021445-RA
Cluster HCCA clusters: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
39499 No alias myb domain protein 13 0.03 Orthogroups_2024-Update
A4A49_12817 No alias myb-related protein pp2 0.03 Orthogroups_2024-Update
A4A49_19591 No alias myb-related protein myb4 0.03 Orthogroups_2024-Update
A4A49_20218 No alias transcription factor myb39 0.03 Orthogroups_2024-Update
A4A49_31933 No alias transcription factor myb86 0.03 Orthogroups_2024-Update
A4A49_34201 No alias transcription factor myb82 0.05 Orthogroups_2024-Update
A4A49_35836 No alias transcription factor myb30 0.04 Orthogroups_2024-Update
A4A49_38619 No alias transcription factor myb86 0.02 Orthogroups_2024-Update
At1g22640 No alias MYB3 [Source:UniProtKB/TrEMBL;Acc:A0A178WFN1] 0.02 Orthogroups_2024-Update
At1g34670 No alias Transcription factor MYB93... 0.02 Orthogroups_2024-Update
At2g26950 No alias Transcription factor MYB104... 0.04 Orthogroups_2024-Update
At2g31180 No alias Transcription factor MYB14... 0.04 Orthogroups_2024-Update
At3g02940 No alias At3g02940 [Source:UniProtKB/TrEMBL;Acc:Q9LDI5] 0.02 Orthogroups_2024-Update
At3g12720 No alias AT3g12720/MBK21_8 [Source:UniProtKB/TrEMBL;Acc:Q9LTW2] 0.04 Orthogroups_2024-Update
At3g13540 No alias MYB5 [Source:UniProtKB/TrEMBL;Acc:A0A178VAR4] 0.03 Orthogroups_2024-Update
At3g30210 No alias MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9LRU5] 0.03 Orthogroups_2024-Update
At3g48920 No alias MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SMT1] 0.03 Orthogroups_2024-Update
At5g10280 No alias Transcription factor MYB92... 0.03 Orthogroups_2024-Update
At5g16770 No alias Myb domain protein 9 [Source:UniProtKB/TrEMBL;Acc:F4KE69] 0.03 Orthogroups_2024-Update
At5g23000 No alias Transcription factor RAX1... 0.04 Orthogroups_2024-Update
At5g40350 No alias Transcription factor MYB24... 0.03 Orthogroups_2024-Update
At5g49620 No alias myb domain protein 78 [Source:TAIR;Acc:AT5G49620] 0.03 Orthogroups_2024-Update
At5g52260 No alias MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9LTJ5] 0.03 Orthogroups_2024-Update
At5g55020 No alias Transcription factor MYB120... 0.03 Orthogroups_2024-Update
At5g57620 No alias Transcription factor MYB36... 0.06 Orthogroups_2024-Update
Bradi1g20540 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
Bradi1g61397 No alias myb domain protein 50 0.03 Orthogroups_2024-Update
Bradi1g64687 No alias myb domain protein 12 0.02 Orthogroups_2024-Update
Bradi4g30220 No alias myb domain protein 94 0.02 Orthogroups_2024-Update
Bradi5g15760 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Brara.A01176.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.04 Orthogroups_2024-Update
Brara.A03909.1 No alias MYB class-R2R3 subgroup-8 transcription factor 0.04 Orthogroups_2024-Update
Brara.C01184.1 No alias MYB class-R2R3 subgroup-14 transcription factor &... 0.03 Orthogroups_2024-Update
Brara.D01054.1 No alias MYB class-R2R3 subgroup-15 transcription factor 0.04 Orthogroups_2024-Update
Brara.E03277.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Brara.F00557.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Brara.F03146.1 No alias transcriptional regulator *(TDF1) 0.03 Orthogroups_2024-Update
Brara.G01913.1 No alias accessory protein (LMI2) of floral meristem identity control 0.03 Orthogroups_2024-Update
Brara.I00690.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Brara.J01999.1 No alias MYB class-R2R3 subgroup-15 transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G070849 No alias myb domain protein 112 0.03 Orthogroups_2024-Update
GRMZM2G081557 No alias myb domain protein 9 0.03 Orthogroups_2024-Update
GRMZM2G160838 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
GRMZM2G167088 No alias myb domain protein 101 0.03 Orthogroups_2024-Update
GRMZM2G395672 No alias myb domain protein 5 0.03 Orthogroups_2024-Update
Glyma.01G004900 No alias myb domain protein 68 0.04 Orthogroups_2024-Update
Glyma.01G196200 No alias myb domain protein 84 0.05 Orthogroups_2024-Update
Glyma.02G009800 No alias myb domain protein 2 0.03 Orthogroups_2024-Update
Glyma.03G250600 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Glyma.05G224300 No alias myb domain protein 68 0.03 Orthogroups_2024-Update
Glyma.05G234600 No alias myb domain protein 116 0.03 Orthogroups_2024-Update
Glyma.06G299900 No alias myb domain protein 14 0.03 Orthogroups_2024-Update
Glyma.07G038000 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Glyma.07G189300 No alias MYB-like 102 0.03 Orthogroups_2024-Update
Glyma.10G165800 No alias myb domain protein 15 0.04 Orthogroups_2024-Update
Glyma.10G236400 No alias myb domain protein 17 0.03 Orthogroups_2024-Update
Glyma.11G030200 No alias myb domain protein 85 0.03 Orthogroups_2024-Update
Glyma.11G045400 No alias myb domain protein 84 0.05 Orthogroups_2024-Update
Glyma.15G264000 No alias myb domain protein 67 0.03 Orthogroups_2024-Update
Glyma.16G007100 No alias myb domain protein 6 0.03 Orthogroups_2024-Update
Glyma.16G007200 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Glyma.16G063700 No alias myb domain protein 40 0.04 Orthogroups_2024-Update
Glyma.16G073000 No alias myb domain protein 21 0.03 Orthogroups_2024-Update
Glyma.17G031600 No alias myb domain protein 111 0.03 Orthogroups_2024-Update
Glyma.17G085600 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.17G158000 No alias myb domain protein 84 0.03 Orthogroups_2024-Update
Glyma.19G164600 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Glyma.19G218800 No alias myb domain protein 2 0.03 Orthogroups_2024-Update
Glyma.20G158100 No alias myb domain protein 17 0.02 Orthogroups_2024-Update
HORVU1Hr1G008810.3 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
HORVU1Hr1G051980.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G037060.3 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g65370 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g42870 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g49986 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g19120 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g20090 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g48870 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g33150 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g43550 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g37970 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10157944g0010 No alias (p20026|myb1_horvu : 261.0) Myb-related protein Hv1 -... 0.04 Orthogroups_2024-Update
MA_10430220g0010 No alias (at3g23250 : 216.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
MA_1201g0010 No alias (q7xbh4|myb4_orysa : 213.0) Myb-related protein Myb4... 0.05 Orthogroups_2024-Update
MA_1589g0010 No alias (at1g63910 : 241.0) member of MYB3R- and R2R3- type MYB-... 0.03 Orthogroups_2024-Update
MA_175772g0010 No alias (at1g22640 : 206.0) MYB-type transcription factor (MYB3)... 0.04 Orthogroups_2024-Update
MA_21440g0010 No alias "(at2g47460 : 187.0) ""MYB12 belongs to subgroup 7 of... 0.03 Orthogroups_2024-Update
MA_37851g0010 No alias (at3g08500 : 182.0) Encodes a putative R2R3-type MYB... 0.04 Orthogroups_2024-Update
MA_8356281g0010 No alias (at3g13540 : 224.0) Encodes a member of the MYB family... 0.04 Orthogroups_2024-Update
MA_93127g0010 No alias (at4g38620 : 220.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
MA_96853g0010 No alias (p93417|gam1_orysa : 259.0) Transcription factor GAMYB... 0.03 Orthogroups_2024-Update
PSME_00001482-RA No alias (at4g22680 : 248.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
PSME_00010773-RA No alias (at1g22640 : 187.0) MYB-type transcription factor (MYB3)... 0.04 Orthogroups_2024-Update
PSME_00014640-RA No alias (at3g27810 : 179.0) Encodes a member of the R2R3-MYB... 0.06 Orthogroups_2024-Update
PSME_00014669-RA No alias (at1g22640 : 190.0) MYB-type transcription factor (MYB3)... 0.05 Orthogroups_2024-Update
PSME_00018495-RA No alias (at3g02940 : 176.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
PSME_00023733-RA No alias (at1g22640 : 175.0) MYB-type transcription factor (MYB3)... 0.04 Orthogroups_2024-Update
PSME_00035013-RA No alias (at4g38620 : 257.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
PSME_00035305-RA No alias (at5g57620 : 219.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
PSME_00036696-RA No alias (at5g16770 : 208.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00037501-RA No alias (p20025|myb38_maize : 253.0) Myb-related protein Zm38 -... 0.04 Orthogroups_2024-Update
PSME_00040054-RA No alias (at3g13890 : 229.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
PSME_00041506-RA No alias "(at2g47460 : 179.0) ""MYB12 belongs to subgroup 7 of... 0.05 Orthogroups_2024-Update
PSME_00042627-RA No alias (at3g61250 : 265.0) Member of the R2R3 factor gene... 0.07 Orthogroups_2024-Update
PSME_00043973-RA No alias (at1g22640 : 191.0) MYB-type transcription factor (MYB3)... 0.05 Orthogroups_2024-Update
PSME_00049306-RA No alias (at5g15310 : 258.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00050866-RA No alias (at1g22640 : 150.0) MYB-type transcription factor (MYB3)... 0.05 Orthogroups_2024-Update
PSME_00051224-RA No alias (at5g15310 : 212.0) Member of the R2R3 factor gene... 0.06 Orthogroups_2024-Update
PSME_00052005-RA No alias (at3g02940 : 213.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
PSME_00052193-RA No alias (at5g65790 : 223.0) Encodes a putative MYB transcription... 0.04 Orthogroups_2024-Update
PSME_00052407-RA No alias (at4g09460 : 211.0) Encodes myb6 DNA-binding protein.;... 0.04 Orthogroups_2024-Update
PSME_00052494-RA No alias (q7xbh4|myb4_orysa : 219.0) Myb-related protein Myb4... 0.04 Orthogroups_2024-Update
PSME_00053156-RA No alias (at1g48000 : 177.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
Potri.001G139900 No alias myb domain protein 9 0.03 Orthogroups_2024-Update
Potri.001G258700 No alias myb domain protein 46 0.02 Orthogroups_2024-Update
Potri.001G267300 No alias myb domain protein 83 0.04 Orthogroups_2024-Update
Potri.003G114100 No alias myb domain protein 42 0.04 Orthogroups_2024-Update
Potri.003G132000 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
Potri.003G144300 No alias myb domain protein 12 0.03 Orthogroups_2024-Update
Potri.003G189700 No alias myb domain protein 33 0.02 Orthogroups_2024-Update
Potri.005G096600 No alias myb domain protein 63 0.03 Orthogroups_2024-Update
Potri.005G224100 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Potri.006G221200 No alias myb domain protein 5 0.04 Orthogroups_2024-Update
Potri.006G275900 No alias myb domain protein 3 0.03 Orthogroups_2024-Update
Potri.008G081600 No alias myb domain protein 67 0.03 Orthogroups_2024-Update
Potri.008G122100 No alias myb domain protein 62 0.05 Orthogroups_2024-Update
Potri.008G128500 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Potri.010G114000 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Potri.010G149900 No alias myb domain protein 108 0.04 Orthogroups_2024-Update
Potri.012G127700 No alias myb domain protein 42 0.03 Orthogroups_2024-Update
Potri.012G140500 No alias myb domain protein 19 0.02 Orthogroups_2024-Update
Potri.013G109300 No alias myb domain protein 3 0.03 Orthogroups_2024-Update
Potri.013G149100 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Potri.015G067700 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.017G128900 No alias myb domain protein 6 0.03 Orthogroups_2024-Update
Potri.017G130300 No alias myb domain protein 43 0.03 Orthogroups_2024-Update
Potri.019G018200 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Potri.019G118900 No alias myb domain protein 63 0.04 Orthogroups_2024-Update
Pp1s277_14V6 No alias myb55 (myb domain protein 55) dna binding transcription factor 0.02 Orthogroups_2024-Update
Seita.1G250600.1 No alias regulatory protein *(LAF1) of phytochrome signalling... 0.03 Orthogroups_2024-Update
Seita.2G199800.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Seita.2G286400.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Seita.3G051800.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Seita.3G333800.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.05 Orthogroups_2024-Update
Seita.3G350800.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Seita.3G402900.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.03 Orthogroups_2024-Update
Seita.5G034500.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Seita.7G284900.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G358900.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G196100.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Sobic.002G423300.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G034500.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G216900.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G303400.1 No alias accessory protein (LMI2) of floral meristem identity control 0.03 Orthogroups_2024-Update
Sobic.006G115200.1 No alias transcriptional regulator *(MS188) & transcriptional... 0.03 Orthogroups_2024-Update
Sobic.006G148000.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.05 Orthogroups_2024-Update
Sobic.007G132600.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Sobic.008G187001.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.04 Orthogroups_2024-Update
Sobic.009G036500.3 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Solyc02g088190 No alias MYB-related transcription factor (AHRD V3.3 *** A0A059PRK4_SALMI) 0.03 Orthogroups_2024-Update
Solyc06g053610 No alias R2R3MYB transcription factor 14 0.04 Orthogroups_2024-Update
Solyc10g005460 No alias MYB transcription factor (AHRD V3.3 *** A0A0U3IU11_MESCR) 0.02 Orthogroups_2024-Update
Solyc11g072060 No alias MYB-related transcription factor (AHRD V3.3 *** A0A059PSR6_SALMI) 0.03 Orthogroups_2024-Update
Sopen01g034190 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen02g036550 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen04g030840 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen05g003580 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen06g018710 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen10g025190 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016714 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 68 113
IPR001005 SANT/Myb 14 62
No external refs found!