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  5. PSME_00021473-RA

PSME_00021473-RA


Description : (at2g45470 : 140.0) FASCICLIN-like arabinogalactan protein 8 (FLA8); LOCATED IN: anchored to plasma membrane, apoplast, plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan-protein 10 (TAIR:AT3G60900.1); Has 14155 Blast hits to 6880 proteins in 856 species: Archae - 79; Bacteria - 4506; Metazoa - 1333; Fungi - 788; Plants - 1999; Viruses - 868; Other Eukaryotes - 4582 (source: NCBI BLink). & (reliability: 280.0) & (original description: no original description)


Gene families : OG_42_0000318 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000318_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00021473-RA
Cluster HCCA clusters: Cluster_292

Target Alias Description ECC score Gene Family Method Actions
A4A49_01102 No alias fasciclin-like arabinogalactan protein 1 0.03 Orthogroups_2024-Update
A4A49_05662 No alias fasciclin-like arabinogalactan protein 3 0.04 Orthogroups_2024-Update
At4g12730 No alias Fasciclin-like arabinogalactan protein 2... 0.03 Orthogroups_2024-Update
Bradi5g04846 No alias FASCICLIN-like arabinogalactan protein 14 precursor 0.03 Orthogroups_2024-Update
LOC_Os01g62380 No alias fasciclin-like arabinogalactan protein, putative, expressed 0.02 Orthogroups_2024-Update
Mp5g05390.1 No alias fasciclin-type arabinogalactan protein 0.02 Orthogroups_2024-Update
Mp5g05430.1 No alias fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Mp5g05440.1 No alias fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Mp5g05460.1 No alias fasciclin-type arabinogalactan protein 0.02 Orthogroups_2024-Update
Mp5g10880.1 No alias fasciclin-type arabinogalactan protein 0.02 Orthogroups_2024-Update
Mp8g03130.1 No alias fasciclin-type arabinogalactan protein. regulatory... 0.01 Orthogroups_2024-Update
PSME_00037137-RA No alias (at2g45470 : 298.0) FASCICLIN-like arabinogalactan... 0.04 Orthogroups_2024-Update
Potri.014G071700 No alias FASCICLIN-like arabinogalactan-protein 10 0.03 Orthogroups_2024-Update
Pp1s13_239V6 No alias F4L23.2; fasciclin-like arabinogalactan-protein (FLA8)... 0.02 Orthogroups_2024-Update
Pp1s159_160V6 No alias Fasciclin-like arabinogalactan protein 10 precursor... 0.02 Orthogroups_2024-Update
Sobic.009G055900.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Solyc03g112880 No alias Fasciclin-like arabinogalactan family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!