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  5. PSME_00021490-RA

PSME_00021490-RA


Description : (at4g26200 : 563.0) Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA.; 1-amino-cyclopropane-1-carboxylate synthase 7 (ACS7); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: 1-amino-cyclopropane-1-carboxylate synthase 8 (TAIR:AT4G37770.1); Has 33519 Blast hits to 33516 proteins in 2975 species: Archae - 937; Bacteria - 23616; Metazoa - 672; Fungi - 820; Plants - 1333; Viruses - 0; Other Eukaryotes - 6141 (source: NCBI BLink). & (q00257|1a12_cucma : 555.0) 1-aminocyclopropane-1-carboxylate synthase CMA101 (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 1126.0) & (original description: no original description)


Gene families : OG_42_0000419 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000419_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00021490-RA
Cluster HCCA clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
A4A49_24774 No alias 1-aminocyclopropane-1-carboxylate synthase 0.03 Orthogroups_2024-Update
A4A49_28180 No alias 1-aminocyclopropane-1-carboxylate synthase 0.06 Orthogroups_2024-Update
A4A49_38026 No alias 1-aminocyclopropane-1-carboxylate synthase 0.03 Orthogroups_2024-Update
A4A49_57945 No alias 1-aminocyclopropane-1-carboxylate synthase 0.03 Orthogroups_2024-Update
At3g49700 No alias 1-aminocyclopropane-1-carboxylate synthase 9... 0.03 Orthogroups_2024-Update
At4g08040 No alias 1-aminocyclopropane-1-carboxylate synthase 11... 0.03 Orthogroups_2024-Update
Bradi5g19100 No alias 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 0.02 Orthogroups_2024-Update
Brara.A00119.1 No alias EC_4.4 carbon-sulfur lyase &... 0.03 Orthogroups_2024-Update
Brara.A01614.1 No alias EC_4.4 carbon-sulfur lyase &... 0.04 Orthogroups_2024-Update
Brara.C02556.1 No alias EC_4.4 carbon-sulfur lyase &... 0.03 Orthogroups_2024-Update
GRMZM2G164405 No alias 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 0.04 Orthogroups_2024-Update
GRMZM5G894619 No alias 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 0.04 Orthogroups_2024-Update
Glyma.05G108900 No alias 1-amino-cyclopropane-1-carboxylate synthase 8 0.03 Orthogroups_2024-Update
Glyma.05G223000 No alias 1-amino-cyclopropane-1-carboxylate synthase 7 0.04 Orthogroups_2024-Update
Glyma.06G049900 No alias 1-amino-cyclopropane-1-carboxylate synthase 8 0.03 Orthogroups_2024-Update
Glyma.07G065700 No alias ACC synthase 1 0.03 Orthogroups_2024-Update
Glyma.16G032200 No alias ACC synthase 1 0.04 Orthogroups_2024-Update
HORVU2Hr1G094230.2 No alias EC_4.4 carbon-sulfur lyase 0.04 Orthogroups_2024-Update
LOC_Os01g09700 No alias aminotransferase, classes I and II, domain containing... 0.03 Orthogroups_2024-Update
MA_10375359g0010 No alias (at4g26200 : 342.0) Member of a family of proteins in... 0.04 Orthogroups_2024-Update
MA_117710g0010 No alias (at4g26200 : 493.0) Member of a family of proteins in... 0.04 Orthogroups_2024-Update
MA_121240g0010 No alias (at4g26200 : 551.0) Member of a family of proteins in... 0.03 Orthogroups_2024-Update
MA_17005g0010 No alias (q00257|1a12_cucma : 566.0)... 0.05 Orthogroups_2024-Update
MA_882654g0010 No alias (p31531|1a1c_soybn : 292.0)... 0.03 Orthogroups_2024-Update
PSME_00024739-RA No alias (p23599|1a11_cucma : 551.0)... 0.04 Orthogroups_2024-Update
Potri.001G099400 No alias 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 0.03 Orthogroups_2024-Update
Potri.003G117700 No alias ACC synthase 10 0.05 Orthogroups_2024-Update
Seita.9G109200.1 No alias EC_4.4 carbon-sulfur lyase &... 0.03 Orthogroups_2024-Update
Sobic.006G187900.1 No alias EC_4.4 carbon-sulfur lyase &... 0.05 Orthogroups_2024-Update
Solyc03g043890 No alias 1-aminocyclopropane-1-carboxylate synthase 0.03 Orthogroups_2024-Update
Solyc07g026900 No alias 1-aminocyclopropane-1-carboxylate synthase (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA InterProScan predictions
MF GO:0030170 pyridoxal phosphate binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006163 purine nucleotide metabolic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009123 nucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009141 nucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009150 purine ribonucleotide metabolic process IEP Predicted GO
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009259 ribonucleotide metabolic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
BP GO:0019693 ribose phosphate metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
BP GO:0046034 ATP metabolic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
BP GO:0072521 purine-containing compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004839 Aminotransferase_I/II 108 489
No external refs found!