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  5. PSME_00021517-RA

PSME_00021517-RA


Description : (at1g12210 : 150.0) RFL1 has high sequence similarity to the adjacent disease resistance (R) gene RPS5.; RPS5-like 1 (RFL1); FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, response to bacterium, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, stem, embryo, sepal, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G12220.2); Has 18050 Blast hits to 15832 proteins in 638 species: Archae - 19; Bacteria - 1098; Metazoa - 2850; Fungi - 219; Plants - 13503; Viruses - 0; Other Eukaryotes - 361 (source: NCBI BLink). & (reliability: 300.0) & (original description: no original description)


Gene families : OG_42_0000113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00021517-RA
Cluster HCCA clusters: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
At4g27190 No alias Disease resistance protein At4g27190... 0.02 Orthogroups_2024-Update
Bradi5g15560 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Brara.A02495.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU2Hr1G089020.1 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_10062820g0010 No alias (at1g12280 : 143.0) LRR and NB-ARC domains-containing... 0.03 Orthogroups_2024-Update
PSME_00011110-RA No alias (at5g43740 : 165.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00033120-RA No alias (at1g63350 : 267.0) Disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00045398-RA No alias (at1g12280 : 140.0) LRR and NB-ARC domains-containing... 0.04 Orthogroups_2024-Update
PSME_00048940-RA No alias (at4g27220 : 141.0) NB-ARC domain-containing disease... 0.04 Orthogroups_2024-Update
Potri.001G404800 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.013G007401 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.T004100 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.T044800 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Sobic.003G435900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.006G146700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sopen08g004810 No alias NB-ARC domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0005347 ATP transmembrane transporter activity IEP Predicted GO
MF GO:0005471 ATP:ADP antiporter activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006862 nucleotide transport IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0008514 organic anion transmembrane transporter activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0015215 nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0015217 ADP transmembrane transporter activity IEP Predicted GO
MF GO:0015301 anion:anion antiporter activity IEP Predicted GO
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Predicted GO
BP GO:0015748 organophosphate ester transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0099516 ion antiporter activity IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 152 399
No external refs found!