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  5. PSME_00021589-RA

PSME_00021589-RA


Description : (at1g68130 : 300.0) indeterminate(ID)-domain 14 (IDD14); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 16 (TAIR:AT1G25250.1); Has 5936 Blast hits to 4695 proteins in 166 species: Archae - 1; Bacteria - 0; Metazoa - 4962; Fungi - 104; Plants - 720; Viruses - 0; Other Eukaryotes - 149 (source: NCBI BLink). & (reliability: 600.0) & (original description: no original description)


Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00021589-RA
Cluster HCCA clusters: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
A4A49_07606 No alias protein shoot gravitropism 5 0.04 Orthogroups_2024-Update
At1g68130 No alias Protein indeterminate-domain 14... 0.03 Orthogroups_2024-Update
Bradi3g51090 No alias indeterminate(ID)-domain 4 0.03 Orthogroups_2024-Update
Bradi4g37540 No alias indeterminate(ID)-domain 7 0.03 Orthogroups_2024-Update
Brara.B03081.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Brara.F03442.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Brara.G02535.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Brara.I02041.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Brara.I02049.1 No alias C2H2 subclass IDD transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G011357 No alias indeterminate(ID)-domain 12 0.02 Orthogroups_2024-Update
GRMZM2G320287 No alias indeterminate(ID)-domain 2 0.03 Orthogroups_2024-Update
GRMZM5G884137 No alias indeterminate(ID)-domain 5 0.03 Orthogroups_2024-Update
Glyma.10G280000 No alias indeterminate(ID)-domain 5 0.02 Orthogroups_2024-Update
Glyma.12G070300 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Glyma.12G118800 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G139000 No alias C2H2-like zinc finger protein 0.02 Orthogroups_2024-Update
Glyma.13G349500 No alias indeterminate(ID)-domain 7 0.03 Orthogroups_2024-Update
Glyma.20G005900 No alias indeterminate(ID)-domain 5 0.03 Orthogroups_2024-Update
LOC_Os02g45054 No alias ZOS2-15 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
MA_10430013g0020 No alias (at1g03840 : 336.0) MGP is a nuclear-localized putative... 0.03 Orthogroups_2024-Update
MA_92989g0010 No alias (at1g68130 : 365.0) indeterminate(ID)-domain 14 (IDD14);... 0.04 Orthogroups_2024-Update
Potri.006G227600 No alias indeterminate(ID)-domain 11 0.02 Orthogroups_2024-Update
Potri.012G040200 No alias C2H2-like zinc finger protein 0.02 Orthogroups_2024-Update
Potri.014G180600 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Pp1s113_55V6 No alias nucleic acid binding 0.02 Orthogroups_2024-Update
Solyc06g062670 No alias zinc finger family protein 0.03 Orthogroups_2024-Update
Solyc06g075250 No alias Zinc finger family protein (AHRD V3.3 *** S8C619_9LAMI) 0.03 Orthogroups_2024-Update
Sopen03g040470 No alias Zinc finger, C2H2 type 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004358 glutamate N-acetyltransferase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006525 arginine metabolic process IEP Predicted GO
BP GO:0006526 arginine biosynthetic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 136 158
No external refs found!