1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00021753-RA

PSME_00021753-RA


Description : "(at5g23190 : 289.0) cytochrome P450 CYP86B1, nuclear gene for chloroplast product. CYP86B1 is a very long chain fatty acid hydroxylase specifically involved in polyester monomer biosynthesis during the course of plant development.; ""cytochrome P450, family 86, subfamily B, polypeptide 1"" (CYP86B1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: very long-chain fatty acid biosynthetic process, suberin biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G08250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 578.0) & (original description: no original description)"


Gene families : OG_42_0000018 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00021753-RA
Cluster HCCA clusters: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
113847 No alias cytochrome P450, family 704, subfamily B, polypeptide 1 0.03 Orthogroups_2024-Update
124000 No alias cytochrome P450, family 86, subfamily B, polypeptide 1 0.03 Orthogroups_2024-Update
432651 No alias cytochrome P450, family 704, subfamily B, polypeptide 1 0.03 Orthogroups_2024-Update
A4A49_07090 No alias cytochrome p450 86a2 0.04 Orthogroups_2024-Update
A4A49_11111 No alias alkane hydroxylase mah1 0.03 Orthogroups_2024-Update
A4A49_32989 No alias cytochrome p450 704c1 0.02 Orthogroups_2024-Update
At1g34540 No alias CYP94D1 [Source:UniProtKB/TrEMBL;Acc:A0A178WEM5] 0.03 Orthogroups_2024-Update
At1g65340 No alias Cytochrome P450, family 96, subfamily A, polypeptide 3... 0.04 Orthogroups_2024-Update
At5g02900 No alias Cytochrome P450, family 96, subfamily A, polypeptide 13... 0.02 Orthogroups_2024-Update
Bradi1g49831 No alias cytochrome P450, family 704, subfamily A, polypeptide 2 0.02 Orthogroups_2024-Update
Bradi5g18920 No alias cytochrome P450, family 704, subfamily A, polypeptide 2 0.03 Orthogroups_2024-Update
Brara.E00512.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.04 Orthogroups_2024-Update
Brara.F01665.1 No alias jasmonoyl-amino acid hydroxylase *(CYP94B) & EC_1.14... 0.03 Orthogroups_2024-Update
Brara.H01796.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.04 Orthogroups_2024-Update
Brara.I05639.1 No alias fatty acyl omega-hydroxylase & EC_1.14 oxidoreductase... 0.02 Orthogroups_2024-Update
GRMZM2G091822 No alias cytochrome P450, family 704, subfamily B, polypeptide 1 0.03 Orthogroups_2024-Update
GRMZM2G164074 No alias cytochrome P450, family 94, subfamily B, polypeptide 3 0.03 Orthogroups_2024-Update
Glyma.05G003100 No alias cytochrome P450, family 96, subfamily A, polypeptide 1 0.03 Orthogroups_2024-Update
Glyma.07G083300 No alias cytochrome P450, family 704, subfamily A, polypeptide 2 0.03 Orthogroups_2024-Update
Glyma.11G175900 No alias cytochrome P450, family 86, subfamily A, polypeptide 1 0.03 Orthogroups_2024-Update
Glyma.20G002700 No alias cytochrome P450, family 86, subfamily B, polypeptide 1 0.05 Orthogroups_2024-Update
HORVU2Hr1G094630.4 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
HORVU3Hr1G020800.1 No alias mid-chain alkane hydroxylase *(MAH1) & EC_1.14... 0.02 Orthogroups_2024-Update
HORVU4Hr1G083930.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.04 Orthogroups_2024-Update
LOC_Os01g08810 No alias cytochrome P450, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g59050 No alias cytochrome P450, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g63540 No alias cytochrome P450, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g04630 No alias cytochrome P450 protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g04680 No alias cytochrome P450, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g37250 No alias cytochrome P450, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g38110 No alias cytochrome P450, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g04290 No alias cytochrome P450, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g25660 No alias cytochrome P450, putative, expressed 0.03 Orthogroups_2024-Update
MA_20022g0010 No alias "(at2g45510 : 476.0) member of CYP704A; ""cytochrome... 0.03 Orthogroups_2024-Update
MA_492311g0010 No alias "(at5g23190 : 316.0) cytochrome P450 CYP86B1, nuclear... 0.04 Orthogroups_2024-Update
PSME_00053361-RA No alias "(at1g63710 : 474.0) Encodes a member of the CYP86A... 0.04 Orthogroups_2024-Update
Potri.003G129100 No alias cytochrome P450, family 86, subfamily A, polypeptide 7 0.02 Orthogroups_2024-Update
Potri.007G072100 No alias cytochrome P450, family 86, subfamily B, polypeptide 1 0.03 Orthogroups_2024-Update
Potri.008G125300 No alias cytochrome P450, family 96, subfamily A, polypeptide 10 0.02 Orthogroups_2024-Update
Potri.012G131201 No alias cytochrome P450, family 704, subfamily A, polypeptide 1 0.04 Orthogroups_2024-Update
Pp1s307_4V6 No alias cytochrome p450 0.02 Orthogroups_2024-Update
Seita.2G061500.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 Orthogroups_2024-Update
Seita.5G388600.1 No alias jasmonoyl-amino acid carboxylase *(CYP94C) & EC_1.14... 0.03 Orthogroups_2024-Update
Seita.7G206400.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 Orthogroups_2024-Update
Seita.7G323700.1 No alias jasmonoyl-amino acid carboxylase *(CYP94C) & EC_1.14... 0.04 Orthogroups_2024-Update
Sobic.001G510400.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 Orthogroups_2024-Update
Sobic.003G040400.1 No alias mid-chain alkane hydroxylase *(MAH1) & EC_1.14... 0.02 Orthogroups_2024-Update
Sobic.005G037000.1 No alias jasmonoyl-amino acid carboxylase *(CYP94C) & EC_1.14... 0.02 Orthogroups_2024-Update
Sobic.008G015000.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Sobic.008G036000.1 No alias jasmonoyl-amino acid carboxylase *(CYP94C) & EC_1.14... 0.02 Orthogroups_2024-Update
Solyc01g094120 No alias Cytochrome P450 family protein (AHRD V3.3 *** A0A061DTZ5_THECC) 0.04 Orthogroups_2024-Update
Solyc01g094140 No alias Cytochrome P450 family protein (AHRD V3.3 *** B9IC22_POPTR) 0.03 Orthogroups_2024-Update
Solyc03g111280 No alias Cytochrome P450, putative (AHRD V3.3 *** B9RAH1_RICCO) 0.03 Orthogroups_2024-Update
Solyc07g006890 No alias Cytochrome P450, putative (AHRD V3.3 *** B9S4U5_RICCO) 0.02 Orthogroups_2024-Update
Sopen01g038530 No alias Cytochrome P450 0.03 Orthogroups_2024-Update
Sopen09g004470 No alias Cytochrome P450 0.03 Orthogroups_2024-Update
Sopen10g031340 No alias Cytochrome P450 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan predictions
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA InterProScan predictions
MF GO:0020037 heme binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
InterPro domains Description Start Stop
IPR001128 Cyt_P450 39 364
No external refs found!