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  5. PSME_00021830-RA

PSME_00021830-RA


Description : (at5g63320 : 245.0) Encodes NPX1 (Nuclear Protein X1), a nuclear factor regulating abscisic acid responses.; nuclear protein X1 (NPX1); FUNCTIONS IN: protein binding, transcription repressor activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: bromodomain and extraterminal domain protein 9 (TAIR:AT5G14270.2); Has 5825 Blast hits to 4645 proteins in 254 species: Archae - 0; Bacteria - 2; Metazoa - 3479; Fungi - 996; Plants - 604; Viruses - 2; Other Eukaryotes - 742 (source: NCBI BLink). & (reliability: 488.0) & (original description: no original description)


Gene families : OG_42_0000275 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000275_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00021830-RA
Cluster HCCA clusters: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
A4A49_27745 No alias transcription factor gte10 0.03 Orthogroups_2024-Update
Brara.J00425.1 No alias transcriptional co-activator *(BET/GTE) 0.03 Orthogroups_2024-Update
MA_10433559g0010 No alias no hits & (original description: no original description) 0.06 Orthogroups_2024-Update
Potri.001G073800 No alias Transcription factor GTE6 0.02 Orthogroups_2024-Update
Potri.001G335000 No alias global transcription factor group E8 0.03 Orthogroups_2024-Update
Sopen02g036270 No alias Bromodomain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
InterPro domains Description Start Stop
IPR027353 NET_dom 383 434
IPR001487 Bromodomain 239 314
No external refs found!