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  5. PSME_00021949-RA

PSME_00021949-RA


Description : (at1g65480 : 109.0) FT, together with LFY, promotes flowering and is antagonistic with its homologous gene, TERMINAL FLOWER1 (TFL1). FT is expressed in leaves and is induced by long day treatment. Either the FT mRNA or protein is translocated to the shoot apex where it induces its own expression. Recent data suggests that FT protein acts as a long-range signal. FT is a target of CO and acts upstream of SOC1.; FLOWERING LOCUS T (FT); FUNCTIONS IN: phosphatidylethanolamine binding, protein binding; INVOLVED IN: photoperiodism, flowering, positive regulation of flower development, regulation of flower development; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylethanolamine-binding, conserved site (InterPro:IPR001858), Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); BEST Arabidopsis thaliana protein match is: PEBP (phosphatidylethanolamine-binding protein) family protein (TAIR:AT4G20370.1); Has 2182 Blast hits to 2182 proteins in 306 species: Archae - 0; Bacteria - 0; Metazoa - 594; Fungi - 140; Plants - 1404; Viruses - 3; Other Eukaryotes - 41 (source: NCBI BLink). & (q9xh44|cet1_tobac : 102.0) CEN-like protein 1 - Nicotiana tabacum (Common tobacco) & (reliability: 218.0) & (original description: no original description)


Gene families : OG_42_0000178 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000178_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00021949-RA
Cluster HCCA clusters: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G108016 No alias PEBP (phosphatidylethanolamine-binding protein) family protein 0.03 Orthogroups_2024-Update
GRMZM2G400167 No alias PEBP (phosphatidylethanolamine-binding protein) family protein 0.03 Orthogroups_2024-Update
Glyma.08G363100 No alias PEBP (phosphatidylethanolamine-binding protein) family protein 0.02 Orthogroups_2024-Update
Glyma.19G194300 No alias PEBP (phosphatidylethanolamine-binding protein) family protein 0.04 Orthogroups_2024-Update
LOC_Os01g11940 No alias osFTL1 FT-Like1 homologous to Flowering Locus T gene;... 0.02 Orthogroups_2024-Update
Potri.015G041000 No alias PEBP (phosphatidylethanolamine-binding protein) family protein 0.02 Orthogroups_2024-Update
Solyc11g008660 No alias Flowering locus T (AHRD V3.3 *** A0A1B4WGF0_PETHY) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR008914 PEBP 273 369
No external refs found!