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  5. PSME_00022014-RA

PSME_00022014-RA


Description : (at5g54160 : 209.0) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3í-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3í-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p28002|comt1_medsa : 209.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Medicago sativa (Alfalfa) & (reliability: 418.0) & (original description: no original description)


Gene families : OG_42_0000016 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000016_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00022014-RA
Cluster HCCA clusters: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
A4A49_41648 No alias trans-resveratrol di-o-methyltransferase 0.03 Orthogroups_2024-Update
At1g51990 No alias F5F19.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU24] 0.03 Orthogroups_2024-Update
At1g62900 No alias F16P17.4 protein [Source:UniProtKB/TrEMBL;Acc:Q9LQ17] 0.02 Orthogroups_2024-Update
Brara.G03470.1 No alias EC_2.1 transferase transferring one-carbon group 0.04 Orthogroups_2024-Update
Brara.J00896.1 No alias caffeic acid O-methyltransferase *(COMT) & EC_2.1... 0.03 Orthogroups_2024-Update
GRMZM2G140996 No alias O-methyltransferase family protein 0.05 Orthogroups_2024-Update
Glyma.11G256500 No alias O-methyltransferase family protein 0.03 Orthogroups_2024-Update
MA_10432099g0010 No alias (q8w013|comt1_catro : 381.0) Caffeic acid... 0.03 Orthogroups_2024-Update
PSME_00002255-RA No alias (q9fqy8|comt1_capan : 423.0) Caffeic acid... 0.04 Orthogroups_2024-Update
PSME_00006686-RA No alias (q9fqy8|comt1_capan : 349.0) Caffeic acid... 0.04 Orthogroups_2024-Update
PSME_00009786-RA No alias (p28002|comt1_medsa : 412.0) Caffeic acid... 0.02 Orthogroups_2024-Update
PSME_00015141-RA No alias (q8w013|comt1_catro : 194.0) Caffeic acid... 0.04 Orthogroups_2024-Update
PSME_00016370-RA No alias (q8w013|comt1_catro : 219.0) Caffeic acid... 0.04 Orthogroups_2024-Update
PSME_00021109-RA No alias (q8w013|comt1_catro : 194.0) Caffeic acid... 0.03 Orthogroups_2024-Update
Potri.002G180600 No alias O-methyltransferase 1 0.02 Orthogroups_2024-Update
Potri.012G006400 No alias O-methyltransferase 1 0.03 Orthogroups_2024-Update
Potri.013G136400 No alias O-methyltransferase family protein 0.03 Orthogroups_2024-Update
Potri.014G106600 No alias O-methyltransferase 1 0.02 Orthogroups_2024-Update
Seita.5G331100.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Seita.8G120600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G101900.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Solyc01g068550 No alias No description available 0.02 Orthogroups_2024-Update
Sopen06g020340 No alias O-methyltransferase 0.02 Orthogroups_2024-Update
Sopen06g034830 No alias O-methyltransferase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005956 protein kinase CK2 complex IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR012967 Plant_MeTrfase_dimerisation 204 262
IPR001077 O_MeTrfase_2 92 187
IPR001077 O_MeTrfase_2 321 529
No external refs found!