Description : (at3g57430 : 642.0) Encodes a chloroplast RNA editing factor.; ORGANELLE TRANSCRIPT PROCESSING 84 (OTP84); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G11290.1); Has 46517 Blast hits to 13331 proteins in 240 species: Archae - 0; Bacteria - 7; Metazoa - 55; Fungi - 91; Plants - 45789; Viruses - 0; Other Eukaryotes - 575 (source: NCBI BLink). & (q76c99|rf1_orysa : 111.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1284.0) & (original description: no original description)
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00022065-RA | |
Cluster | HCCA clusters: Cluster_92 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
108969 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
34426 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.05 | Orthogroups_2024-Update | |
42377 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Orthogroups_2024-Update | |
82058 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
At2g36730 | No alias | Pentatricopeptide repeat-containing protein At2g36730... | 0.04 | Orthogroups_2024-Update | |
Bradi1g36010 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
Bradi1g53600 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.03 | Orthogroups_2024-Update | |
Bradi4g40340 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
Brara.B00112.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Glyma.09G236700 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.16G206000 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.20G112100 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
HORVU2Hr1G081690.1 | No alias | RNA editing factor *(OTP86) | 0.03 | Orthogroups_2024-Update | |
LOC_Os09g15800 | No alias | tetratricopeptide-like helical, putative, expressed | 0.03 | Orthogroups_2024-Update | |
MA_183278g0010 | No alias | (at3g12770 : 619.0) Encodes a pentatricopeptide repeat... | 0.04 | Orthogroups_2024-Update | |
MA_412g0010 | No alias | (at2g13600 : 442.0) Pentatricopeptide repeat (PPR)... | 0.04 | Orthogroups_2024-Update | |
MA_683665g0010 | No alias | (at4g13650 : 717.0) Pentatricopeptide repeat (PPR)... | 0.04 | Orthogroups_2024-Update | |
PSME_00006511-RA | No alias | (at1g11290 : 568.0) Pentatricopeptide Repeat Protein... | 0.04 | Orthogroups_2024-Update | |
PSME_00028519-RA | No alias | (at2g22070 : 606.0) pentatricopeptide (PPR)... | 0.04 | Orthogroups_2024-Update | |
PSME_00036495-RA | No alias | (at1g11290 : 559.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
PSME_00056168-RA | No alias | (at3g61170 : 686.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
PSME_00056594-RA | No alias | (at3g53360 : 383.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
Seita.7G324400.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.003G336400.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sopen01g033110 | No alias | PPR repeat | 0.02 | Orthogroups_2024-Update | |
Sopen09g004810 | No alias | PPR repeat | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0007275 | multicellular organism development | IEP | Predicted GO |
BP | GO:0032501 | multicellular organismal process | IEP | Predicted GO |
BP | GO:0032502 | developmental process | IEP | Predicted GO |
BP | GO:0048856 | anatomical structure development | IEP | Predicted GO |
No external refs found! |