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  5. PSME_00022100-RA

PSME_00022100-RA


Description : (at5g45190 : 293.0) Encodes a cyclin T partner CYCT1;5. Plays important roles in infection with Cauliflower mosaic virus (CaMV).; Cyclin family protein; FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Transcription regulator cyclin (InterPro:IPR015429), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT4G19600.1); Has 4079 Blast hits to 3698 proteins in 345 species: Archae - 2; Bacteria - 149; Metazoa - 1860; Fungi - 545; Plants - 474; Viruses - 8; Other Eukaryotes - 1041 (source: NCBI BLink). & (reliability: 586.0) & (original description: no original description)


Gene families : OG_42_0000736 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000736_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00022100-RA
Cluster HCCA clusters: Cluster_675

Target Alias Description ECC score Gene Family Method Actions
Bradi2g13487 No alias Cyclin family protein 0.04 Orthogroups_2024-Update
Bradi3g11180 No alias Cyclin family protein 0.02 Orthogroups_2024-Update
Glyma.11G004500 No alias Cyclin family protein 0.05 Orthogroups_2024-Update
Glyma.20G023500 No alias Cyclin family protein 0.01 Orthogroups_2024-Update
Pp1s264_33V6 No alias K18C1.7; cyclin family [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.1G096500.1 No alias regulatory protein *(CYCT) of cell cycle 0.03 Orthogroups_2024-Update
Sopen07g015350 No alias Cyclin, N-terminal domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006671 Cyclin_N 2 73
No external refs found!