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  5. PSME_00022178-RA

PSME_00022178-RA


Description : (at3g03190 : 171.0) Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase F11 (GSTF11); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase phi 12 (TAIR:AT5G17220.1); Has 10837 Blast hits to 10834 proteins in 1289 species: Archae - 0; Bacteria - 5319; Metazoa - 1959; Fungi - 659; Plants - 879; Viruses - 0; Other Eukaryotes - 2021 (source: NCBI BLink). & (p30109|gstf1_tobac : 162.0) Glutathione S-transferase PARB (EC 2.5.1.18) (GST class-phi) - Nicotiana tabacum (Common tobacco) & (reliability: 342.0) & (original description: no original description)


Gene families : OG_42_0000154 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000154_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00022178-RA
Cluster HCCA clusters: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
Mp5g00690.1 No alias class phi glutathione S-transferase 0.02 Orthogroups_2024-Update
Potri.010G024300 No alias glutathione S-transferase phi 8 0.02 Orthogroups_2024-Update
Pp1s26_74V6 No alias glutathione s-transferase 0.02 Orthogroups_2024-Update
Pp1s83_192V6 No alias No description available 0.03 Orthogroups_2024-Update
evm.model.tig00021319.64 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004045 Glutathione_S-Trfase_N 13 86
IPR004046 GST_C 137 202
No external refs found!