Sopen05g031710

Description : MuDR family transposase

Gene families : OG_42_0000103 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000103_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen05g031710
Cluster	HCCA clusters: Cluster_165

Target	Alias	Description	ECC score	Gene Family Method
Brara.A03692.1	No alias	Unknown function	0.06	Orthogroups_2024-Update
GRMZM2G130905	No alias	MuDR family transposase	0.02	Orthogroups_2024-Update
HORVU2Hr1G013810.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
HORVU2Hr1G013840.1	No alias	Unknown function	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR018289	MULE_transposase_dom	363	453
IPR000270	PB1_dom	23	100
IPR004332	Transposase_MuDR	169	232
IPR007527	Znf_SWIM	616	645

External Links

No external refs found!