1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00022316-RA

PSME_00022316-RA


Description : (at1g56150 : 81.6) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT3G12830.1); Has 1156 Blast hits to 1154 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1155; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 163.2) & (original description: no original description)


Gene families : OG_42_0000526 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000526_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00022316-RA
Cluster HCCA clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G146108 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
GRMZM2G332390 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
LOC_Os03g45830 No alias OsSAUR15 - Auxin-responsive SAUR gene family member 0.03 Orthogroups_2024-Update
Potri.007G067800 No alias SAUR-like auxin-responsive protein family 0.02 Orthogroups_2024-Update
Sobic.006G216500.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009733 response to auxin IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003676 SAUR_fam 25 102
No external refs found!