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  5. PSME_00022332-RA

PSME_00022332-RA


Description : (at2g40470 : 197.0) LOB domain-containing protein 15 (LBD15); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 13 (TAIR:AT2G30340.1); Has 1010 Blast hits to 1005 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 1006; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 394.0) & (original description: no original description)


Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00022332-RA
Cluster HCCA clusters: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
A4A49_10474 No alias lob domain-containing protein 25 0.02 Orthogroups_2024-Update
A4A49_25203 No alias lob domain-containing protein 11 0.07 Orthogroups_2024-Update
At2g30340 No alias LBD13 [Source:UniProtKB/TrEMBL;Acc:A0A178VRU4] 0.03 Orthogroups_2024-Update
At2g40470 No alias LOB domain-containing protein 15... 0.03 Orthogroups_2024-Update
At3g26620 No alias LOB domain-containing protein 23... 0.04 Orthogroups_2024-Update
At3g27650 No alias LOB domain-containing protein 25... 0.04 Orthogroups_2024-Update
At5g15060 No alias LOB domain-containing protein 34... 0.03 Orthogroups_2024-Update
Bradi1g65760 No alias LOB domain-containing protein 1 0.02 Orthogroups_2024-Update
Bradi2g53690 No alias LOB domain-containing protein 13 0.02 Orthogroups_2024-Update
Brara.B01673.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Brara.B03305.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
Brara.C02407.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Brara.D02463.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Brara.F02209.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Brara.G00548.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Brara.I00725.1 No alias AS2/LOB-type transcription factor 0.05 Orthogroups_2024-Update
GRMZM2G092517 No alias LOB domain-containing protein 13 0.02 Orthogroups_2024-Update
GRMZM2G133806 No alias Lateral organ boundaries (LOB) domain family protein 0.02 Orthogroups_2024-Update
GRMZM2G154320 No alias ASYMMETRIC LEAVES 2-like 1 0.02 Orthogroups_2024-Update
Glyma.02G234600 No alias LOB domain-containing protein 13 0.04 Orthogroups_2024-Update
Glyma.04G106400 No alias ASYMMETRIC LEAVES 2-like 1 0.03 Orthogroups_2024-Update
Glyma.05G040500 No alias Lateral organ boundaries (LOB) domain family protein 0.05 Orthogroups_2024-Update
Glyma.06G178900 No alias Lateral organ boundaries (LOB) domain family protein 0.02 Orthogroups_2024-Update
Glyma.13G349700 No alias LOB domain-containing protein 22 0.03 Orthogroups_2024-Update
Glyma.14G021100 No alias LOB domain-containing protein 24 0.03 Orthogroups_2024-Update
Glyma.14G202300 No alias LOB domain-containing protein 13 0.03 Orthogroups_2024-Update
Glyma.15G045200 No alias LOB domain-containing protein 11 0.03 Orthogroups_2024-Update
Glyma.15G258100 No alias LOB domain-containing protein 4 0.06 Orthogroups_2024-Update
Glyma.17G086300 No alias Lateral organ boundaries (LOB) domain family protein 0.04 Orthogroups_2024-Update
Glyma.18G024400 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G016690.1 No alias AS2/LOB-type transcription factor 0.04 Orthogroups_2024-Update
HORVU4Hr1G013630.8 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
HORVU4Hr1G084750.2 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os05g03160 No alias DUF260 domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g27980 No alias DUF260 domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_127139g0010 No alias (at1g31320 : 199.0) LOB domain-containing protein 4... 0.03 Orthogroups_2024-Update
MA_161608g0010 No alias (at5g63090 : 189.0) Involved in lateral organ... 0.05 Orthogroups_2024-Update
MA_16891g0010 No alias (at5g63090 : 175.0) Involved in lateral organ... 0.05 Orthogroups_2024-Update
MA_19975g0010 No alias (at2g28500 : 96.3) LOB domain-containing protein 11... 0.03 Orthogroups_2024-Update
MA_451290g0010 No alias (at1g07900 : 140.0) LOB domain-containing protein 1... 0.05 Orthogroups_2024-Update
MA_84752g0010 No alias (at2g40470 : 201.0) LOB domain-containing protein 15... 0.06 Orthogroups_2024-Update
MA_85817g0010 No alias (at1g07900 : 152.0) LOB domain-containing protein 1... 0.03 Orthogroups_2024-Update
MA_902082g0010 No alias (at1g07900 : 123.0) LOB domain-containing protein 1... 0.04 Orthogroups_2024-Update
MA_9924708g0010 No alias (at1g31320 : 131.0) LOB domain-containing protein 4... 0.03 Orthogroups_2024-Update
PSME_00022409-RA No alias (at1g07900 : 148.0) LOB domain-containing protein 1... 0.05 Orthogroups_2024-Update
PSME_00028054-RA No alias (at1g07900 : 124.0) LOB domain-containing protein 1... 0.05 Orthogroups_2024-Update
PSME_00039447-RA No alias (at2g28500 : 163.0) LOB domain-containing protein 11... 0.02 Orthogroups_2024-Update
PSME_00041736-RA No alias (at1g07900 : 133.0) LOB domain-containing protein 1... 0.05 Orthogroups_2024-Update
PSME_00042673-RA No alias (at1g07900 : 125.0) LOB domain-containing protein 1... 0.03 Orthogroups_2024-Update
PSME_00043015-RA No alias (at2g28500 : 127.0) LOB domain-containing protein 11... 0.03 Orthogroups_2024-Update
PSME_00043149-RA No alias (at1g07900 : 141.0) LOB domain-containing protein 1... 0.1 Orthogroups_2024-Update
PSME_00048626-RA No alias (at1g07900 : 148.0) LOB domain-containing protein 1... 0.04 Orthogroups_2024-Update
PSME_00053746-RA No alias (at1g07900 : 130.0) LOB domain-containing protein 1... 0.04 Orthogroups_2024-Update
Potri.003G039700 No alias LOB domain-containing protein 22 0.03 Orthogroups_2024-Update
Potri.014G167100 No alias LOB domain-containing protein 11 0.02 Orthogroups_2024-Update
Pp1s12_355V6 No alias ramosa 2 0.03 Orthogroups_2024-Update
Pp1s73_7V6 No alias lob domain-containing 0.04 Orthogroups_2024-Update
Pp1s9_303V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.3G045800.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
Seita.9G168800.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Seita.9G443300.1 No alias AS2/LOB-type transcription factor 0.05 Orthogroups_2024-Update
Sobic.001G409200.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G383700.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.008G190800.1 No alias AS2/LOB-type transcription factor 0.04 Orthogroups_2024-Update
Solyc01g044520 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc01g109240 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc06g050950 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc06g071660 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc11g045530 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Sopen02g016910 No alias Protein of unknown function DUF260 0.02 Orthogroups_2024-Update
Sopen03g031510 No alias Protein of unknown function DUF260 0.02 Orthogroups_2024-Update
Sopen11g004610 No alias Protein of unknown function DUF260 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 18 114
No external refs found!