1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00022341-RA

PSME_00022341-RA


Description : "(at3g48520 : 275.0) member of CYP94B; ""cytochrome P450, family 94, subfamily B, polypeptide 3"" (CYP94B3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 1 (TAIR:AT5G63450.1); Has 27655 Blast hits to 27536 proteins in 1435 species: Archae - 44; Bacteria - 2616; Metazoa - 10459; Fungi - 5693; Plants - 7745; Viruses - 3; Other Eukaryotes - 1095 (source: NCBI BLink). & (reliability: 550.0) & (original description: no original description)"


Gene families : OG_42_0000018 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00022341-RA
Cluster HCCA clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
151517 No alias cytochrome P450, family 704, subfamily B, polypeptide 1 0.03 Orthogroups_2024-Update
A4A49_08073 No alias alkane hydroxylase mah1 0.04 Orthogroups_2024-Update
A4A49_08283 No alias alkane hydroxylase mah1 0.04 Orthogroups_2024-Update
A4A49_24652 No alias cytochrome p450 86a1 0.03 Orthogroups_2024-Update
A4A49_27048 No alias cytochrome p450 704c1 0.06 Orthogroups_2024-Update
A4A49_29237 No alias cytochrome p450 94c1 0.03 Orthogroups_2024-Update
A4A49_65323 No alias cytochrome p450 94b3 0.05 Orthogroups_2024-Update
At1g34540 No alias CYP94D1 [Source:UniProtKB/TrEMBL;Acc:A0A178WEM5] 0.04 Orthogroups_2024-Update
At2g21910 No alias Cytochrome P450, family 96, subfamily A, polypeptide 5... 0.03 Orthogroups_2024-Update
At4g39500 No alias cytochrome P450, family 96, subfamily A, polypeptide 11... 0.04 Orthogroups_2024-Update
Bradi1g73796 No alias cytochrome P450, family 704, subfamily B, polypeptide 1 0.03 Orthogroups_2024-Update
Bradi2g55490 No alias cytochrome P450, family 94, subfamily C, polypeptide 1 0.04 Orthogroups_2024-Update
Bradi3g31697 No alias cytochrome P450, family 704, subfamily A, polypeptide 2 0.04 Orthogroups_2024-Update
Brara.A00062.1 No alias mid-chain alkane hydroxylase *(MAH1) & EC_1.14... 0.04 Orthogroups_2024-Update
Brara.B02237.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 Orthogroups_2024-Update
Brara.B03850.1 No alias jasmonoyl-amino acid hydroxylase *(CYP94B) & EC_1.14... 0.03 Orthogroups_2024-Update
Brara.E00512.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.05 Orthogroups_2024-Update
Brara.F02230.1 No alias jasmonoyl-amino acid hydroxylase *(CYP94B) & EC_1.14... 0.03 Orthogroups_2024-Update
Brara.F03854.1 No alias mid-chain alkane hydroxylase *(MAH1) & EC_1.14... 0.03 Orthogroups_2024-Update
Brara.G01703.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Brara.H01795.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 Orthogroups_2024-Update
Brara.I01629.1 No alias mid-chain alkane hydroxylase *(MAH1) & EC_1.14... 0.05 Orthogroups_2024-Update
Brara.I04612.1 No alias mid-chain alkane hydroxylase *(MAH1) & EC_1.14... 0.06 Orthogroups_2024-Update
Brara.J00036.1 No alias fatty acyl omega-hydroxylase & EC_1.14 oxidoreductase... 0.06 Orthogroups_2024-Update
Glyma.03G008100 No alias cytochrome P450, family 86, subfamily A, polypeptide 8 0.03 Orthogroups_2024-Update
Glyma.03G160200 No alias cytochrome P450, family 94, subfamily B, polypeptide 1 0.02 Orthogroups_2024-Update
Glyma.05G208981 No alias cytochrome P450, family 86, subfamily A, polypeptide 8 0.03 Orthogroups_2024-Update
Glyma.07G069500 No alias cytochrome P450, family 86, subfamily A, polypeptide 8 0.03 Orthogroups_2024-Update
Glyma.14G192500 No alias cytochrome P450, family 86, subfamily A, polypeptide 1 0.03 Orthogroups_2024-Update
HORVU2Hr1G001150.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.05 Orthogroups_2024-Update
HORVU2Hr1G001160.1 No alias mid-chain alkane hydroxylase *(MAH1) & EC_1.14... 0.04 Orthogroups_2024-Update
LOC_Os01g63930 No alias cytochrome P450, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g04650 No alias cytochrome P450 protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g04680 No alias cytochrome P450, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g47250 No alias cytochrome P450, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g48460 No alias cytochrome P450, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g05380 No alias cytochrome P450, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g25660 No alias cytochrome P450, putative, expressed 0.02 Orthogroups_2024-Update
MA_10429672g0010 No alias "(at3g48520 : 441.0) member of CYP94B; ""cytochrome... 0.03 Orthogroups_2024-Update
MA_169256g0010 No alias "(at2g45510 : 459.0) member of CYP704A; ""cytochrome... 0.03 Orthogroups_2024-Update
MA_18375g0010 No alias "(at5g63450 : 409.0) member of CYP94B; ""cytochrome... 0.03 Orthogroups_2024-Update
MA_221187g0010 No alias "(at5g23190 : 405.0) cytochrome P450 CYP86B1, nuclear... 0.03 Orthogroups_2024-Update
MA_7127108g0010 No alias "(at5g23190 : 208.0) cytochrome P450 CYP86B1, nuclear... 0.02 Orthogroups_2024-Update
MA_81663g0010 No alias "(at3g48520 : 379.0) member of CYP94B; ""cytochrome... 0.03 Orthogroups_2024-Update
MA_84749g0010 No alias "(at3g48520 : 458.0) member of CYP94B; ""cytochrome... 0.03 Orthogroups_2024-Update
Mp1g05180.1 No alias long-chain fatty acid hydroxylase 0.03 Orthogroups_2024-Update
Potri.001G397900 No alias cytochrome P450, family 96, subfamily A, polypeptide 10 0.03 Orthogroups_2024-Update
Potri.002G042200 No alias cytochrome P450, family 94, subfamily B, polypeptide 1 0.03 Orthogroups_2024-Update
Potri.008G183300 No alias cytochrome P450, family 86, subfamily C, polypeptide 1 0.02 Orthogroups_2024-Update
Potri.015G086900 No alias cytochrome P450, family 96, subfamily A, polypeptide 1 0.02 Orthogroups_2024-Update
Potri.016G031800 No alias cytochrome P450, family 94, subfamily D, polypeptide 1 0.02 Orthogroups_2024-Update
Pp1s307_4V6 No alias cytochrome p450 0.02 Orthogroups_2024-Update
Pp1s332_42V6 No alias cytochrome p450 0.03 Orthogroups_2024-Update
Seita.3G299800.1 No alias jasmonoyl-amino acid hydroxylase *(CYP94B) & EC_1.14... 0.07 Orthogroups_2024-Update
Seita.7G206400.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Seita.8G120900.1 No alias jasmonoyl-amino acid hydroxylase *(CYP94B) & EC_1.14... 0.06 Orthogroups_2024-Update
Seita.9G347500.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.08 Orthogroups_2024-Update
Seita.9G526100.1 No alias long-chain fatty acid hydroxylase *(CYP704B) & EC_1.14... 0.05 Orthogroups_2024-Update
Sobic.001G319800.2 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.04 Orthogroups_2024-Update
Sobic.003G040400.1 No alias mid-chain alkane hydroxylase *(MAH1) & EC_1.14... 0.03 Orthogroups_2024-Update
Sobic.005G037000.1 No alias jasmonoyl-amino acid carboxylase *(CYP94C) & EC_1.14... 0.04 Orthogroups_2024-Update
Sobic.008G036000.1 No alias jasmonoyl-amino acid carboxylase *(CYP94C) & EC_1.14... 0.04 Orthogroups_2024-Update
Solyc03g111280 No alias Cytochrome P450, putative (AHRD V3.3 *** B9RAH1_RICCO) 0.03 Orthogroups_2024-Update
Solyc03g111300 No alias Cytochrome P450, putative (AHRD V3.3 *** B9RAH1_RICCO) 0.03 Orthogroups_2024-Update
Solyc10g078280 No alias Cytochrome P450, putative (AHRD V3.3 *** A0A061FPW5_THECC) 0.03 Orthogroups_2024-Update
Sopen00g007980 No alias Cytochrome P450 0.02 Orthogroups_2024-Update
Sopen01g037920 No alias Cytochrome P450 0.02 Orthogroups_2024-Update
Sopen07g002990 No alias Cytochrome P450 0.04 Orthogroups_2024-Update
Sopen10g031330 No alias Cytochrome P450 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan predictions
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA InterProScan predictions
MF GO:0020037 heme binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001128 Cyt_P450 27 276
No external refs found!