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  5. PSME_00022424-RA

PSME_00022424-RA


Description : (at5g09740 : 343.0) Encodes an enzyme with histone acetyltransferase activity. HAM2 primarily acetylate histone H4, but also display some ability to acetylate H3. Prior acetylation of lysine 5 on histone H4 reduces radioactive acetylation by either HAM2.; histone acetyltransferase of the MYST family 2 (HAM2); FUNCTIONS IN: histone acetyltransferase activity, zinc ion binding, nucleic acid binding; INVOLVED IN: chromatin assembly or disassembly, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Chromo domain (InterPro:IPR000953), Acyl-CoA N-acyltransferase (InterPro:IPR016181), MOZ/SAS-like protein (InterPro:IPR002717); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the MYST family 1 (TAIR:AT5G64610.1); Has 1870 Blast hits to 1533 proteins in 232 species: Archae - 0; Bacteria - 4; Metazoa - 1014; Fungi - 461; Plants - 151; Viruses - 0; Other Eukaryotes - 240 (source: NCBI BLink). & (q8li34|myst1_orysa : 187.0) Putative MYST-like histone acetyltransferase 1 (EC 2.3.1.48) - Oryza sativa (Rice) & (reliability: 686.0) & (original description: no original description)


Gene families : OG_42_0003802 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003802_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00022424-RA
Cluster HCCA clusters: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
Kfl00203_0120 kfl00203_0120_v1.1 (q8li34|myst1_orysa : 417.0) Putative MYST-like histone... 0.02 Orthogroups_2024-Update
evm.model.contig_2090.24 No alias (q8li34|myst1_orysa : 355.0) Putative MYST-like histone... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004402 histone acetyltransferase activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
BP GO:0016573 histone acetylation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR025995 Tudor-knot 52 107
IPR002717 HAT_MYST-type 162 250
No external refs found!