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  5. PSME_00022449-RA

PSME_00022449-RA


Description : (at2g40260 : 137.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G38300.1); Has 1902 Blast hits to 1885 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 17; Plants - 1623; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (reliability: 274.0) & (original description: no original description)


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00022449-RA
Cluster HCCA clusters: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
A4A49_09886 No alias putative transcription factor kan2 0.05 Orthogroups_2024-Update
A4A49_11176 No alias putative myb family transcription factor 0.03 Orthogroups_2024-Update
A4A49_31971 No alias myb family transcription factor phl11 0.02 Orthogroups_2024-Update
A4A49_36129 No alias protein phosphate starvation response 1 0.03 Orthogroups_2024-Update
At2g02060 No alias Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q7X887] 0.03 Orthogroups_2024-Update
At2g20400 No alias myb-like HTH transcriptional regulator family protein... 0.03 Orthogroups_2024-Update
At2g42660 No alias At2g45350/F14N22.7 [Source:UniProtKB/TrEMBL;Acc:Q9SJJ0] 0.03 Orthogroups_2024-Update
At3g04030 No alias Myb-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SQQ9] 0.03 Orthogroups_2024-Update
Bradi1g31837 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi1g32370 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g36260 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g36710 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g52320 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g26802 No alias myb-like HTH transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Brara.A00897.1 No alias KANADI-type transcription factor 0.03 Orthogroups_2024-Update
Brara.B02368.1 No alias regulatory protein *(FE) of florigen biosynthesis & GARP... 0.03 Orthogroups_2024-Update
Brara.J01739.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G035370 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
GRMZM2G052544 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G370425 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.03G143600 No alias myb-like HTH transcriptional regulator family protein 0.04 Orthogroups_2024-Update
Glyma.07G106800 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G004500 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
Glyma.09G113000 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Glyma.10G039700 No alias phosphate starvation response 1 0.02 Orthogroups_2024-Update
Glyma.11G183400 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
Glyma.11G213700 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G228900 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Glyma.16G152200 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G097900.21 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G107670.1 No alias transcription factor *(CLAUSA) 0.02 Orthogroups_2024-Update
PSME_00043566-RA No alias (at3g04030 : 229.0) Homeodomain-like superfamily... 0.06 Orthogroups_2024-Update
Potri.004G010000 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G191000 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Potri.008G087600 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.008G142000 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.012G042100 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Seita.3G199300.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
Seita.4G175600.1 No alias transcription factor *(CLAUSA) 0.02 Orthogroups_2024-Update
Seita.8G019800.1 No alias transcription factor *(CLAUSA) 0.03 Orthogroups_2024-Update
Solyc03g006150 No alias LOW QUALITY:MYB-like transcription factor family protein... 0.04 Orthogroups_2024-Update
Solyc12g006280 No alias Homeodomain-like superfamily protein (AHRD V3.3 *-* AT2G40260.1) 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 75 125
No external refs found!