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  5. PSME_00022546-RA

PSME_00022546-RA


Description : (at5g04200 : 293.0) metacaspase 9 (MC9); FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: apoplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase C14, caspase catalytic (InterPro:IPR011600); BEST Arabidopsis thaliana protein match is: metacaspase 6 (TAIR:AT1G79320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 586.0) & (original description: no original description)


Gene families : OG_42_0001055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00022546-RA
Cluster HCCA clusters: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
Brara.G03652.1 No alias programmed cell death metacaspase-like regulator *(MCP2) 0.02 Orthogroups_2024-Update
Brara.G03655.1 No alias programmed cell death metacaspase-like regulator *(MCP2) 0.02 Orthogroups_2024-Update
Brara.J02762.1 No alias programmed cell death metacaspase-like regulator *(MCP2) 0.03 Orthogroups_2024-Update
MA_2555g0010 No alias (at5g04200 : 200.0) metacaspase 9 (MC9); FUNCTIONS IN:... 0.04 Orthogroups_2024-Update
Pp1s43_239V6 No alias metacaspase type ii 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!