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  5. PSME_00022548-RA

PSME_00022548-RA


Description : (at5g04200 : 289.0) metacaspase 9 (MC9); FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: apoplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase C14, caspase catalytic (InterPro:IPR011600); BEST Arabidopsis thaliana protein match is: metacaspase 6 (TAIR:AT1G79320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 578.0) & (original description: no original description)


Gene families : OG_42_0001055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00022548-RA
Cluster HCCA clusters: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Brara.G03652.1 No alias programmed cell death metacaspase-like regulator *(MCP2) 0.04 Orthogroups_2024-Update
Brara.J02762.1 No alias programmed cell death metacaspase-like regulator *(MCP2) 0.04 Orthogroups_2024-Update
Glyma.08G233300 No alias metacaspase 5 0.03 Orthogroups_2024-Update
PSME_00017308-RA No alias (at5g04200 : 294.0) metacaspase 9 (MC9); FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
PSME_00030402-RA No alias (at1g79330 : 298.0) Metacaspase AtMCPb2/AMC6. Caspase... 0.03 Orthogroups_2024-Update
PSME_00030404-RA No alias (at5g04200 : 290.0) metacaspase 9 (MC9); FUNCTIONS IN:... 0.05 Orthogroups_2024-Update
Potri.016G024500 No alias metacaspase 9 0.07 Orthogroups_2024-Update
Solyc10g081300 No alias Metacaspase 9 (AHRD V3.3 *** M4Y069_CAPAN),Pfam:PF00656 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!