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  5. PSME_00022562-RA

PSME_00022562-RA


Description : (at5g18840 : 402.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G48020.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q41144|stc_ricco : 122.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 804.0) & (original description: no original description)


Gene families : OG_42_0000524 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000524_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00022562-RA
Cluster HCCA clusters: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
A4A49_24562 No alias sugar transporter erd6-like 6 0.03 Orthogroups_2024-Update
Glyma.13G213300 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G152400 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Mp1g02000.1 No alias monosaccharide transporter (ERD6) 0.02 Orthogroups_2024-Update
PSME_00008855-RA No alias (at1g19450 : 279.0) Major facilitator superfamily... 0.04 Orthogroups_2024-Update
PSME_00022527-RA No alias (at1g19450 : 433.0) Major facilitator superfamily... 0.06 Orthogroups_2024-Update
Solyc04g080460 No alias Sugar facilitator protein 4 0.02 Orthogroups_2024-Update
Solyc09g074230 No alias SlSFP7 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 128 433
No external refs found!