Description : (at1g62940 : 648.0) encodes an acyl-CoA synthetase, has in vitro activity towards medium- to long-chain fatty acids and their hydroxylated derivatives. Expressed in the tapetum. Involved in pollen wall exine formation. Null mutants were devoid of pollen grains at anther maturity and were completely male sterile.; acyl-CoA synthetase 5 (ACOS5); CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: 4-coumarate:CoA ligase 2 (TAIR:AT3G21240.1); Has 80303 Blast hits to 72777 proteins in 3663 species: Archae - 1209; Bacteria - 52830; Metazoa - 3472; Fungi - 4003; Plants - 2782; Viruses - 1; Other Eukaryotes - 16006 (source: NCBI BLink). & (p14913|4cl2_petcr : 383.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Petroselinum crispum (Parsley) (Petroselinum hortense) & (reliability: 1296.0) & (original description: no original description)
Gene families : OG_42_0000133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000133_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00022570-RA | |
Cluster | HCCA clusters: Cluster_163 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At1g62940 | No alias | 4-coumarate--CoA ligase-like 1... | 0.03 | Orthogroups_2024-Update | |
Bradi3g37300 | No alias | 4-coumarate:CoA ligase 2 | 0.03 | Orthogroups_2024-Update | |
Brara.E02091.1 | No alias | p-coumarate | 0.03 | Orthogroups_2024-Update | |
Glyma.15G001700 | No alias | 4-coumarate:CoA ligase 2 | 0.04 | Orthogroups_2024-Update | |
HORVU6Hr1G030390.2 | No alias | p-coumarate | 0.03 | Orthogroups_2024-Update | |
PSME_00008139-RA | No alias | (p31685|4cl2_soltu : 666.0) 4-coumarate--CoA ligase 2... | 0.05 | Orthogroups_2024-Update | |
PSME_00010613-RA | No alias | (at1g20510 : 572.0) OPC-8:0 CoA ligase1 (OPCL1);... | 0.03 | Orthogroups_2024-Update | |
PSME_00019640-RA | No alias | (at1g20510 : 494.0) OPC-8:0 CoA ligase1 (OPCL1);... | 0.04 | Orthogroups_2024-Update | |
Potri.005G248500 | No alias | OPC-8:0 CoA ligase1 | 0.03 | Orthogroups_2024-Update | |
Sobic.004G062500.1 | No alias | p-coumarate | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003824 | catalytic activity | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003682 | chromatin binding | IEP | Predicted GO |
MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
MF | GO:0004379 | glycylpeptide N-tetradecanoyltransferase activity | IEP | Predicted GO |
MF | GO:0004478 | methionine adenosyltransferase activity | IEP | Predicted GO |
MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | Predicted GO |
BP | GO:0006099 | tricarboxylic acid cycle | IEP | Predicted GO |
BP | GO:0006101 | citrate metabolic process | IEP | Predicted GO |
BP | GO:0006281 | DNA repair | IEP | Predicted GO |
BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | Predicted GO |
BP | GO:0006950 | response to stress | IEP | Predicted GO |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Predicted GO |
MF | GO:0008964 | phosphoenolpyruvate carboxylase activity | IEP | Predicted GO |
BP | GO:0015977 | carbon fixation | IEP | Predicted GO |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | Predicted GO |
MF | GO:0016831 | carboxy-lyase activity | IEP | Predicted GO |
BP | GO:0016999 | antibiotic metabolic process | IEP | Predicted GO |
MF | GO:0019107 | myristoyltransferase activity | IEP | Predicted GO |
BP | GO:0033554 | cellular response to stress | IEP | Predicted GO |
BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | Predicted GO |
BP | GO:0051716 | cellular response to stimulus | IEP | Predicted GO |
BP | GO:0072350 | tricarboxylic acid metabolic process | IEP | Predicted GO |
No external refs found! |